Description

Ensembl ID ENSCABG00000016743 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 3377 bases Strand Minus strand
Position PKMU01002734.1 : 1632105 - 1635481 RNA binding domain Ribosomal_S13
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCABP00000022763 Ribosomal_S13 PF00416 2.8e-18 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCABT00000024932 234 77aa ENSCABP00000022763

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000000114636.904835.119chelonoidis_abingdoniiENSCABP0000002276380.519576.6234

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276376.623462.3377caenorhabditis_elegansY57G11C.16.138.311731.1688
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276375.324763.6364drosophila_melanogasterFBpp008558538.157932.2368
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220872.7273eptatretus_burgeriENSEBUP0000002110226.872224.6696
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276350.649345.4545latimeria_chalumnaeENSLACP0000001239930.468827.3438
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234clupea_harengusENSCHAP0000001986138.993737.1069
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247danio_rerioENSDARP0000013305440.789538.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247carassius_auratusENSCARP0000000513040.789538.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247carassius_auratusENSCARP0000008298240.789538.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276337.662322.0779astyanax_mexicanusENSAMXP0000004519416.29219.55056
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234ictalurus_punctatusENSIPUP0000000666740.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247electrophorus_electricusENSEEEP0000000598540.789538.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234esox_luciusENSELUP0000001961440.522938.5621
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234oncorhynchus_mykissENSOMYP0000003326440.259738.3117
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234oncorhynchus_mykissENSOMYP0000005160540.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234salmo_salarENSSSAP0000011204240.259738.3117
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234salmo_truttaENSSTUP0000007371840.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234salmo_truttaENSSTUP0000008021640.259738.3117
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247gadus_morhuaENSGMOP0000001150240.789538.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234fundulus_heteroclitusENSFHEP0000002534840.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234poecilia_reticulataENSPREP0000003225240.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234xiphophorus_maculatusENSXMAP0000002665240.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234oryzias_latipesENSORLP0000000137228.97227.5701
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234cyclopterus_lumpusENSCLMP0000501670728.703727.3148
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276320.779216.8831oreochromis_niloticusENSONIP000000621451.547391.25725
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220875.3247haplochromis_burtoniENSHBUP0000001126940.131638.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220875.3247astatotilapia_callipteraENSACLP0000001615740.397438.4106
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234sparus_aurataENSSAUP0001000169434.636932.9609
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247xenopus_tropicalisENSXETP0000008876737.575835.1515
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234choloepus_hoffmanniENSCHOP0000000331052.542450
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276367.532559.7403dasypus_novemcinctusENSDNOP0000002831736.619732.3944
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276350.649346.7532echinops_telfairiENSETEP0000001368168.421163.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276377.922174.026macaca_fascicularisENSMFAP0000002701571.428667.8571
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276374.02668.8312callithrix_jacchusENSCJAP000000830373835.3333
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276374.02666.2338gorilla_gorillaENSGGOP0000004150645.640.8
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276377.922172.7273papio_anubisENSPANP0000002784339.473736.8421
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276375.324767.5325pan_paniscusENSPPAP0000001525346.441.6
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276370.129963.6364mandrillus_leucophaeusENSMLEP0000001545437.534.0278
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276325.97418.1818canis_lupus_familiarisENSCAFP0084502884811.90488.33333
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276355.844248.0519felis_catusENSFCAP0000004476131.159426.8116
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276345.454538.961panthera_pardusENSPPRP0000001205826.923123.0769
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276328.571420.7792loxodonta_africanaENSLAFP0000002304521.359215.534
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276376.623471.4286sus_scrofaENSSSCP0000000934538.815836.1842
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276359.740354.5455camelus_dromedariusENSCDRP0000500470133.576630.6569
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276374.02670.1299ochotona_princepsENSOPRP0000000087750.442547.7876
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276327.272716.8831capra_hircusENSCHIP0000002236913.46158.33333
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276371.428663.6364urocitellus_parryiiENSUPAP0001002888767.073259.7561
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276377.922174.026marmota_marmota_marmotaENSMMMP0000000679139.473737.5
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276374.02664.9351cricetulus_griseus_chok1gshdENSCGRP0000101009742.537337.3134
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220874.026mus_musculusENSMUSP0000012689240.131637.5
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276355.844250.6493mesocricetus_auratusENSMAUP0000001977630.935328.0576
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276364.935164.9351mus_spretusMGP_SPRETEiJ_P004599941.322341.3223
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276364.935158.4416rattus_norvegicusENSRNOP0000004028229.411826.4706
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276376.623472.7273rattus_norvegicusENSRNOP0000009408771.951268.2927
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276375.324771.4286mus_spicilegusENSMSIP0000002564539.189237.1622
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234dicentrarchus_labraxENSDLAP0000507245440.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220874.026erpetoichthys_calabaricusENSECRP0000002845340.131637.5
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234cyprinodon_variegatusENSCVAP0000000859640.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234anolis_carolinensisENSACAP0000000287729.383927.9621
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234bos_indicus_hybridENSBIXP0000503357133.879832.2404
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276357.142954.5455microcebus_murinusENSMICP0000004227836.065634.4262
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276361.03957.1429microcebus_murinusENSMICP0000004793933.81331.6547
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234takifugu_rubripesENSTRUP0000003415943.055640.9722
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234oryzias_melastigmaENSOMEP0000002837940.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276315.58449.09091neolamprologus_brichardiENSNBRP00000002821127
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276370.129963.6364tupaia_belangeriENSTBEP0000000942765.853759.7561
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234kryptolebias_marmoratusENSKMAP0000001899640.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276353.246851.9481saimiri_boliviensis_boliviensisENSSBOP0000003297433.333332.5203
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276363.636457.1429saimiri_boliviensis_boliviensisENSSBOP0000001091766.216259.4595
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276355.844250.6493saimiri_boliviensis_boliviensisENSSBOP0000003952965.151559.0909
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276363.636459.7403saimiri_boliviensis_boliviensisENSSBOP0000002916834.265732.1678
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234seriola_dumeriliENSSDUP0000001671040.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247pygocentrus_nattereriENSPNAP0000003679540.789538.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234poecilia_formosaENSPFOP0000000524340.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234poecilia_latipinnaENSPLAP0000002208837.125735.3293
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234scophthalmus_maximusENSSMAP0000002377237.349435.5422
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234cottoperca_gobioENSCGOP0000000988240.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276372.727361.039ciona_savignyiENSCSAVP0000000897440.287833.813
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234labrus_bergyltaENSLBEP0000002970740.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276362.337758.4416nomascus_leucogenysENSNLEP0000003311867.605663.3803
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276366.233864.9351nomascus_leucogenysENSNLEP0000002457738.931338.1679
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234hucho_huchoENSHHUP0000001972438.993737.1069
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234hucho_huchoENSHHUP0000000030836.046534.3023
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234anabas_testudineusENSATEP0000004444540.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220875.3247amphilophus_citrinellusENSACIP0000000801040.131638.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234acanthochromis_polyacanthusENSAPOP0000000158740.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234amphiprion_ocellarisENSAOCP0000001826240.259738.3117
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234gasterosteus_aculeatusENSGACP0000001297340.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220872.7273sinocyclocheilus_grahamiENSSGRP0000000726174.390268.2927
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247sinocyclocheilus_grahamiENSSGRP0000004099939.490436.9427
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234sander_luciopercaENSSLUP0000005059140.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234nothobranchius_furzeriENSNFUP0001503098540.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276359.740349.3507saccharomyces_cerevisiaeYDR450W31.506826.0274
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276359.740349.3507saccharomyces_cerevisiaeYML026C31.506826.0274
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234oryzias_sinensisENSOSIP0000002125740.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276368.831261.039prolemur_simusENSPSMP0000001371733.974430.1282
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276383.116979.2208gopherus_evgoodeiENSGEVP0000502215686.486582.4324
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234larimichthys_croceaENSLCRP000050028883129.5
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276358.441655.8442oryzias_javanicusENSOJAP0000004131935.433133.8583
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234oryzias_javanicusENSOJAP0000002878540.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234betta_splendensENSBSLP0000000883238.271636.4198
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234stegastes_partitusENSSPAP0000001004440.789538.8158
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276366.233859.7403neovison_visonENSNVIP0000001663564.55758.2278
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247hippocampus_comesENSHCOP0000002166640.789538.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234amphiprion_perculaENSAPEP0000000548534.444432.7778
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220875.3247maylandia_zebraENSMZEP0000503611740.131638.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234denticeps_clupeoidesENSDCDP0000002627034.831533.1461
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247scleropages_formosusENSSFOP0001502872935.838233.526
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234cynoglossus_semilaevisENSCSEP0000002850040.259738.3117
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234myripristis_murdjanENSMMDP0000501598835.632233.908
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276375.324771.4286cebus_imitatorENSCCAP0000002764046.774244.3548
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276370.129964.9351cebus_imitatorENSCCAP0000001438870.129964.9351
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276366.233862.3377cebus_imitatorENSCCAP0000001193838.931336.6412
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247paramormyrops_kingsleyaeENSPKIP0000000262040.789538.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234tetraodon_nigroviridisENSTNIP0000000552641.059639.0728
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234seriola_lalandi_dorsalisENSSLDP0000002600627.312825.9912
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276367.532561.039carlito_syrichtaENSTSYP0000002328136.363632.8671
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519576.6234cyprinus_carpio_carpioENSCCRP0000017493931.472129.9492
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220875.3247pundamilia_nyerereiENSPNYP0000003079540.131638.1579
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276367.532564.9351leptobrachium_leishanenseENSLLEP0000000733334.666733.3333
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276380.519575.3247mastacembelus_armatusENSMAMP0000003131037.575835.1515
ENSCABG00000016743chelonoidis_abingdoniiENSCABP0000002276379.220875.3247propithecus_coquereliENSPCOP0000002440040.131638.1579

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression