Description

Ensembl ID ENSCABG00000003297 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 37030 bases Strand Plus strand
Position PKMU01006500.1 : 66967 - 103996 RNA binding domain TPP1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCABP00000004380 TPP1 PF10341 4e-16 1
ENSCABP00000004378 TPP1 PF10341 4e-16 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCABT00000004753 3382 542aa ENSCABP00000004378
- ENSCABT00000004755 2965 540aa ENSCABP00000004380

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCABG00000003297

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437834.870818.6347callorhinchus_miliiENSCMIP0000004605627.591214.7445
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437834.870819.0037lepisosteus_oculatusENSLOCP0000000828530.095516.4013
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.752812.5461danio_rerioENSDARP0000014266730.916814.4989
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.014813.4686carassius_auratusENSCARP0000007069328.716914.8676
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437830.996315.6827esox_luciusENSELUP0000001151427.54113.9344
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.937314.5756fundulus_heteroclitusENSFHEP0000001545224.092413.0363
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437825.276812.7306poecilia_reticulataENSPREP0000002846230.995515.6109
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.121813.6531xiphophorus_maculatusENSXMAP0000000624529.817415.0101
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.413314.5756oryzias_latipesENSORLP0000003593829.558515.1631
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.889314.5756haplochromis_burtoniENSHBUP0000001653529.779414.5221
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.859814.3911astatotilapia_callipteraENSACLP0000000122330.443515.7258
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.121813.2841lates_calcariferENSLCAP0001004457830.882415.126
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437838.376423.4317xenopus_tropicalisENSXETP0000003909130.409418.5673
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437883.394879.1513chrysemys_picta_belliiENSCPBP0000001786873.856270.098
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437860.332145.203crocodylus_porosusENSCPRP0000500061550.697737.9845
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437845.387527.6753laticauda_laticaudataENSLLTP0000001015638.080523.2198
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437845.20333.0258anas_platyrhynchos_platyrhynchosENSAPLP0000002537738.401328.0564
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437843.726931.7343meleagris_gallopavoENSMGAP0000000168043.406631.5018
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437852.58338.0074gallus_gallusENSGALP0001003335942.410730.6548
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437854.79740.2214parus_majorENSPMJP0000001895242.489331.1874
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.782316.9742ornithorhynchus_anatinusENSOANP0000004079950.322629.6774
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437825.092314.7601notamacropus_eugeniiENSMEUP0000001469844.884526.4026
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.752814.7601erinaceus_europaeusENSEEUP0000000176627.462115.1515
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437834.686321.0332sarcophilus_harrisiiENSSHAP0000003810235.27221.3884
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103318.6347dasypus_novemcinctusENSDNOP0000000114535.876320.8247
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.5572macaca_fascicularisENSMFAP0000003762338.461523.2967
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.5572macaca_mulattaENSMMUP0000001283938.461523.2967
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.734319.1882callithrix_jacchusENSCJAP0000002966738.222223.1111
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.5572macaca_nemestrinaENSMNEP0000001477433.783820.4633
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472318.8192gorilla_gorillaENSGGOP0000003479937.052621.4737
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472319.7417papio_anubisENSPANP0000001554938.681323.5165
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472319.1882pan_troglodytesENSPTRP0000008224238.427922.7074
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.0037pan_paniscusENSPPAP0000000566138.209622.4891
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103319.3727mandrillus_leucophaeusENSMLEP0000000877633.786420.3883
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.3727pongo_abeliiENSPPYP0000000843132.169119.3015
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.0037homo_sapiensENSP0000047808438.209622.4891
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103319.1882ursus_americanusENSUAMP0000002021338.495623.0089
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.490815.6827vulpes_vulpesENSVVUP0000001695237.2521.25
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.1882ailuropoda_melanoleucaENSAMEP0000001848438.716823.0089
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.918818.2657canis_lupus_familiarisENSCAFP0084500983738.02221.7582
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287818.8192mustela_putorius_furoENSMPUP0000000635335.353520.6061
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437833.025819.0037felis_catusENSFCAP0000000860539.514322.7373
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.044314.7601panthera_leoENSPLOP0000002420532.478617.094
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103319.7417delphinapterus_leucasENSDLEP0000000430638.32623.5683
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.656818.8192panthera_pardusENSPPRP0000000624937.521.6102
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.9262physeter_catodonENSPCTP0000502251138.546323.7885
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437821.955713.4686tursiops_truncatusENSTTRP0000000872722.326513.6961
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.7417balaenoptera_musculusENSBMSP0001002551238.546323.5683
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.7417equus_asinusENSEASP0000505114338.461523.5165
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.966815.3137loxodonta_africanaENSLAFP0000000598336.342619.213
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437830.073818.4502equus_caballusENSECAP0000001781336.961522.6757
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437822.878213.0996procavia_capensisENSPCAP0000000906923.61913.5238
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.180818.8192sus_scrofaENSSSCP0000002717337.555622.6667
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437833.948320.2952camelus_dromedariusENSCDRP0000502009436.822
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472319.0037bos_taurusENSBTAP0000002515933.65219.6941
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.335816.9742ochotona_princepsENSOPRP0000001237931.176518.0392
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103318.8192ovis_aries_rambouilletENSOARP0002000408238.241822.4176
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472319.0037capra_hircusENSCHIP0000003097938.427922.4891
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437813.09967.01107oryctolagus_cuniculusENSOCUP0000000778552.205927.9412
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.966816.0517urocitellus_parryiiENSUPAP0001000097536.941220.4706
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.704816.9742marmota_marmota_marmotaENSMMMP0000001686436.590920.9091
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437812.17717.01107cricetulus_griseus_chok1gshdENSCGRP0000100768148.529427.9412
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.704816.6052mus_caroliMGP_CAROLIEiJ_P008583438.424821.4797
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.335816.6052mus_musculusENSMUSP0000004818038.221221.6346
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.044315.8672mesocricetus_auratusENSMAUP0000000800137.163821.0269
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.520316.6052mus_spretusMGP_SPRETEiJ_P008933338.461521.6346
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.782316.4207rattus_norvegicusENSRNOP0000005633436.879421.0402
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.335816.7897mus_pahariMGP_PahariEiJ_P005408738.313321.9277
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.151316.4207mus_spicilegusENSMSIP0000001954437.980821.3942
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.782315.6827cavia_porcellusENSCPOP0000000962237.054620.19
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.335815.8672heterocephalus_glaber_femaleENSHGLP0000003063237.677720.3791
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.413315.1292octodon_degusENSODEP0000002149535.981319.1589
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437834.501819.1882monodelphis_domesticaENSMODP0000000706835.084419.5122
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.752813.4686dicentrarchus_labraxENSDLAP0000504338529.471514.8374
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437834.132818.8192erpetoichthys_calabaricusENSECRP0000001064731.841717.5559
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437823.985213.8376cyprinodon_variegatusENSCVAP0000001343230.878917.8147
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103319.1882ursus_maritimusENSUMAP0000002698338.495623.0089
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472318.8192bos_grunniensENSBGRP0000004152933.65219.5029
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472319.0037bos_indicus_hybridENSBIXP0000501920533.65219.6941
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437833.948319.0037vombatus_ursinusENSVURP0001002801037.398420.935
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.520317.7122microcebus_murinusENSMICP0000001107731.434218.8605
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.014813.0996takifugu_rubripesENSTRUP0000005179328.031814.1153
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437833.210319.0037otolemur_garnettiiENSOGAP0000001708237.267121.3251
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.199313.6531neolamprologus_brichardiENSNBRP0000002158030.735916.0173
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.335816.4207chinchilla_lanigeraENSCLAP0000000760233.615218.8161
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437846.67929.7048naja_najaENSNNAP0000002312034.896622.2069
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.841317.8967phascolarctos_cinereusENSPCIP0000002314145.876325
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103319.5572aotus_nancymaaeENSANAP0000003099634.661421.1155
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437815.49828.85609tupaia_belangeriENSTBEP0000000768323.076913.1868
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.7417monodon_monocerosENSMMNP0001500271838.546323.5683
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.734319.0037saimiri_boliviensis_boliviensisENSSBOP0000002719834.468920.6413
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.918819.1882phocoena_sinusENSPSNP0000002848138.105722.9075
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.490814.2066pygocentrus_nattereriENSPNAP0000000187429.044815.0097
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.490814.5756ictidomys_tridecemlineatusENSSTOP0000001472931.501116.7019
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103318.6347bison_bison_bisonENSBBBP0000000707438.241822.1978
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.306313.4686poecilia_formosaENSPFOP0000000238130.578515.0826
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.918819.0037catagonus_wagneriENSCWAP0000000644638.530122.9399
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.306313.4686poecilia_latipinnaENSPLAP0000000843230.641815.1139
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437830.258316.7897jaculus_jaculusENSJJAP0000000536638.862621.564
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437854.05938.3764geospiza_fortisENSGFOP0000001668641.619329.5455
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103318.8192sciurus_vulgarisENSSVLP0000502869038.410622.5166
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437833.763819.7417myotis_lucifugusENSMLUP0000000479635.952921.0216
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103318.6347rhinolophus_ferrumequinumENSRFEP0001002624938.32622.2467
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437854.79739.2989ficedula_albicollisENSFALP0000002977942.187530.2557
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437851.291536.1624taeniopygia_guttataENSTGUP0000003291142.967530.2937
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.734319.1882rhinopithecus_bietiENSRBIP0000003832432.575819.697
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472319.5572chlorocebus_sabaeusENSCSAP0000000029732.774719.7393
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.656819.1882nomascus_leucogenysENSNLEP0000004604337.420721.9873
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.180816.0517anabas_testudineusENSATEP0000007026830.395715.6475
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.5572rhinopithecus_roxellanaENSRROP0000000164533.206820.1139
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437852.21433.9483podarcis_muralisENSPMRP0000001217942.684827.7526
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.937312.9151amphilophus_citrinellusENSACIP0000001969231.263414.9893
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287818.6347bos_mutusENSBMUP0000000440238.461522.1978
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287819.0037moschus_moschiferusENSMMSP0000000186934.381120.2358
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.383812.9151acanthochromis_polyacanthusENSAPOP0000001383730.105314.7368
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.228816.0517microtus_ochrogasterENSMOCP0000002311238.2521.75
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.841318.8192panthera_tigris_altaicaENSPTIP0000002023339.293622.5166
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.734319.0037cervus_hanglu_yarkandensisENSCHYP0000001735538.826223.2506
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437824.538711.6236sinocyclocheilus_grahamiENSSGRP0000004097527.366312.963
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437847.601530.0738salvator_merianaeENSSMRP0000001111641.346226.1218
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.287818.6347pteropus_vampyrusENSPVAP0000001566133.206819.1651
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437826.568313.8376oryzias_sinensisENSOSIP0000003967231.578916.4474
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.734318.2657prolemur_simusENSPSMP0000001401137.636821.663
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437890.221487.4539gopherus_evgoodeiENSGEVP0000502334567.541465.4696
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437822.324711.6236oryzias_javanicusENSOJAP0000001382128.403814.7887
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.597814.3911betta_splendensENSBSLP0000004989831.440215.8215
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.472318.8192neovison_visonENSNVIP0000001222538.852122.5166
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437827.859814.3911maylandia_zebraENSMZEP0000502163830.443515.7258
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.782315.8672nannospalax_galiliENSNGAP0000000128137.231520.5251
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437841.328431.7343strigops_habroptilaENSSHBP0000500117940.215430.8797
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.151316.9742peromyscus_maniculatus_bairdiiENSPEMP0000001290237.440821.8009
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437853.6940.5904aquila_chrysaetos_chrysaetosENSACCP0002000513149.574137.4787
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437832.103319.7417cebus_imitatorENSCCAP0000001106834.184721.0216
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437856.088643.3579struthio_camelus_australisENSSCUP0000000716150.414638.9718
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437829.151317.5277carlito_syrichtaENSTSYP0000001878631.919219.1919
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437828.228814.0221pundamilia_nyerereiENSPNYP0000000914731.416815.6057
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437836.531422.3247leptobrachium_leishanenseENSLLEP0000001184529.032317.7419
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437830.996318.2657propithecus_coquereliENSPCOP0000003028532.748519.2982
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437889.852485.7934terrapene_carolina_triunguisENSTMTP0000001327271.512568.2819
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437890.036985.6089terrapene_carolina_triunguisENSTMTP0000001347569.81466.3805
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437831.549817.8967canis_lupus_dingoENSCAFP0002002312437.521.2719
ENSCABG00000003297chelonoidis_abingdoniiENSCABP0000000437854.243540.9594anser_brachyrhynchusENSABRP0000000438145.794434.5794

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression