RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBTAG00000050222	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4401 bases	Strand	Plus strand
Position	7 : 71358400 - 71362800	RNA binding domain	Ribosomal_L30
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBTAP00000059712	Ribosomal_L30	PF00327	3.2e-06	1
ENSBTAP00000073313	Ribosomal_L30	PF00327	4.1e-06	1
ENSBTAP00000070104	Ribosomal_L30	PF00327	4.6e-06	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBTAT00000086904	540	179aa	ENSBTAP00000070104
-	ENSBTAT00000082359	444	147aa	ENSBTAP00000059712
-	ENSBTAT00000076378	492	163aa	ENSBTAP00000073313

Gene Model

Click here to download ENSBTAG00000050222's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBTAG00000050222's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBTAG00000050222	bos_taurus	ENSBTAP00000005183	55.9006	48.4472	bos_taurus	ENSBTAP00000070104	50.2793	43.5754

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.7207	40.7821	sarcophilus_harrisii	ENSSHAP00000033033	55.2795	45.3416
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	47.486	39.1061	choloepus_hoffmanni	ENSCHOP00000005136	52.1472	42.9448
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.3966	42.4581	dasypus_novemcinctus	ENSDNOP00000030024	57.1429	47.205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	42.4581	dasypus_novemcinctus	ENSDNOP00000017852	58.125	47.5
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	44.1341	dasypus_novemcinctus	ENSDNOP00000014475	57.764	49.0683
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	44.6927	dasypus_novemcinctus	ENSDNOP00000025715	59.6154	51.2821
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.7207	43.0168	echinops_telfairi	ENSETEP00000004076	52.3529	45.2941
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	44.1341	callithrix_jacchus	ENSCJAP00000013148	47.9798	39.899
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	42.4581	cercocebus_atys	ENSCATP00000036561	59.0062	47.205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	42.4581	macaca_fascicularis	ENSMFAP00000004020	59.0062	47.205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	52.514	41.8994	macaca_mulatta	ENSMMUP00000070810	58.3851	46.5839
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	40.7821	31.2849	macaca_nemestrina	ENSMNEP00000020688	54.4776	41.791
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	42.4581	papio_anubis	ENSPANP00000041815	59.0062	47.205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	52.514	43.5754	gorilla_gorilla	ENSGGOP00000035658	58.3851	48.4472
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	42.4581	mandrillus_leucophaeus	ENSMLEP00000007442	59.0062	47.205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	43.5754	pan_paniscus	ENSPPAP00000032064	59.0062	48.4472
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	43.5754	pan_troglodytes	ENSPTRP00000021034	59.0062	48.4472
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	43.0168	pongo_abelii	ENSPPYP00000042998	57.764	47.8261
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.6313	44.6927	homo_sapiens	ENSP00000338057	59.6273	49.6894
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	47.486	37.4302	felis_catus	ENSFCAP00000058569	47.2222	37.2222
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	55.3073	46.9274	delphinapterus_leucas	ENSDLEP00000015968	63.4615	53.8462
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	44.6927	loxodonta_africana	ENSLAFP00000006835	50.8197	43.7158
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	46.3687	37.4302	mesocricetus_auratus	ENSMAUP00000015313	58.042	46.8531
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	41.8994	mesocricetus_auratus	ENSMAUP00000024491	56.0241	45.1807
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	52.514	42.4581	mesocricetus_auratus	ENSMAUP00000019334	54.6512	44.186
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.838	43.0168	marmota_marmota_marmota	ENSMMMP00000022580	58.7097	49.6774
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	48.6034	39.6648	vombatus_ursinus	ENSVURP00010000293	54.0373	44.0994
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	48.0447	39.1061	mus_spicilegus	ENSMSIP00000012657	53.75	43.75
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	46.3687	36.8715	mus_spicilegus	ENSMSIP00000021222	51.875	41.25
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	48.6034	40.7821	mus_spicilegus	ENSMSIP00000007332	54.375	45.625
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	48.0447	39.6648	mus_spicilegus	ENSMSIP00000004254	55.1282	45.5128
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.7207	41.8994	cavia_porcellus	ENSCPOP00000009619	57.4194	48.3871
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.162	41.3408	dipodomys_ordii	ENSDORP00000010087	54.321	45.679
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	46.3687	36.8715	rattus_norvegicus	ENSRNOP00000079080	52.2013	41.5094
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.162	41.3408	rattus_norvegicus	ENSRNOP00000083246	47.3118	39.7849
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.162	40.7821	mus_spretus	MGP_SPRETEiJ_P0018240	55	45.625
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.3966	43.5754	otolemur_garnettii	ENSOGAP00000002000	55.0898	46.7066
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	52.514	41.8994	otolemur_garnettii	ENSOGAP00000016336	58.3851	46.5839
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.2793	41.8994	otolemur_garnettii	ENSOGAP00000019310	56.962	47.4684
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	43.5754	myotis_lucifugus	ENSMLUP00000021261	57.764	48.4472
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	45.8101	37.4302	microcebus_murinus	ENSMICP00000016554	53.5948	43.7908
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.3966	44.1341	microcebus_murinus	ENSMICP00000010575	57.1429	49.0683
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	45.2514	39.6648	microcebus_murinus	ENSMICP00000020467	60	52.5926
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.2793	40.2235	octodon_degus	ENSODEP00000013464	55.9006	44.7205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.162	40.2235	octodon_degus	ENSODEP00000008056	54.6584	44.7205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.2793	40.2235	octodon_degus	ENSODEP00000025857	50.2793	40.2235
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.2793	40.2235	octodon_degus	ENSODEP00000025434	50.2793	40.2235
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.838	42.4581	oryctolagus_cuniculus	ENSOCUP00000003556	56.5217	47.205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	48.0447	40.2235	mus_musculus	ENSMUSP00000027256	53.75	45
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	37.9888	33.5196	tupaia_belangeri	ENSTBEP00000006665	39.7661	35.0877
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.7207	41.3408	mus_caroli	MGP_CAROLIEiJ_P0017238	55.625	46.25
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	42.4581	rhinopithecus_roxellana	ENSRROP00000043247	59.0062	47.205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	43.5754	aotus_nancymaae	ENSANAP00000020956	59.0062	48.4472
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.7207	40.2235	nannospalax_galili	ENSNGAP00000021014	55.625	45
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	44.1341	prolemur_simus	ENSPSMP00000027783	57.764	49.0683
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.0726	45.2514	propithecus_coquereli	ENSPCOP00000005238	59.0062	50.3106
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.3966	44.6927	propithecus_coquereli	ENSPCOP00000000351	57.1429	49.6894
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	77.095	73.1844	bison_bison_bison	ENSBBBP00000026481	74.5946	70.8108
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	41.8994	32.4022	carlito_syrichta	ENSTSYP00000023768	50.6757	39.1892
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.838	43.5754	carlito_syrichta	ENSTSYP00000031451	56.5217	48.4472
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.838	42.4581	ochotona_princeps	ENSOPRP00000006713	54.491	45.509
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	52.514	44.1341	nomascus_leucogenys	ENSNLEP00000042462	58.3851	49.0683
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	41.3408	32.9609	nomascus_leucogenys	ENSNLEP00000025972	51.7483	41.2587
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	34.0782	28.4916	sorex_araneus	ENSSARP00000000780	44.8529	37.5
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.7207	39.6648	rhinopithecus_bieti	ENSRBIP00000036252	57.4194	45.8064
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.2793	41.8994	peromyscus_maniculatus_bairdii	ENSPEMP00000020326	56.25	46.875
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	47.486	39.6648	peromyscus_maniculatus_bairdii	ENSPEMP00000005255	53.125	44.375
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.838	43.5754	jaculus_jaculus	ENSJJAP00000003232	56.5217	48.4472
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	78.2123	72.6257	bos_grunniens	ENSBGRP00000027414	79.096	73.4463
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	43.5754	chinchilla_lanigera	ENSCLAP00000008109	51.9553	43.5754
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.162	40.7821	mus_pahari	MGP_PahariEiJ_P0072586	55	45.625
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	48.6034	39.6648	phascolarctos_cinereus	ENSPCIP00000047432	54.0373	44.0994
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	53.6313	44.1341	saimiri_boliviensis_boliviensis	ENSSBOP00000040689	59.6273	49.0683
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	27.933	22.3464	saimiri_boliviensis_boliviensis	ENSSBOP00000010595	57.4713	45.977
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.2793	41.8994	sciurus_vulgaris	ENSSVLP00005014365	55.9006	46.5839
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.7207	42.4581	sciurus_vulgaris	ENSSVLP00005018675	55.2795	47.205
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	55.3073	46.9274	phocoena_sinus	ENSPSNP00000019586	63.4615	53.8462
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	52.514	41.8994	chlorocebus_sabaeus	ENSCSAP00000013255	58.3851	46.5839
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.2793	41.8994	cricetulus_griseus_chok1gshd	ENSCGRP00001004754	56.25	46.875
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	49.7207	41.3408	microtus_ochrogaster	ENSMOCP00000006049	55.625	46.25
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.3966	43.0168	urocitellus_parryii	ENSUPAP00010006117	59.3548	49.6774
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	50.2793	41.8994	cebus_imitator	ENSCCAP00000003034	56.6038	47.1698
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	51.9553	42.4581	cebus_imitator	ENSCCAP00000032871	58.125	47.5
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	40.2235	28.4916	gadus_morhua	ENSGMOP00000013450	45.5696	32.2785
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	40.2235	29.0503	sphenodon_punctatus	ENSSPUP00000000839	40.9091	29.5455
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	37.4302	24.581	coturnix_japonica	ENSCJPP00005000103	42.1384	27.673
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	39.1061	27.3743	hucho_hucho	ENSHHUP00000047090	39.548	27.6836
ENSBTAG00000050222	bos_taurus	ENSBTAP00000070104	41.8994	31.2849	gopherus_evgoodei	ENSGEVP00005000140	51.7241	38.6207

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression