RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBTAG00000004564	Gene ID		Accession	-
Symbol	MBNL1	Alias	-	Full Name	muscleblind like splicing regulator 1
Status	Confidence	Length	221251 bases	Strand	Minus strand
Position	1 : 115303718 - 115524968	RNA binding domain	zf-CCCH , zf-CCCH_2
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSBTAP00000005998	zf-CCCH	PF00642	3.9e-10	1
ENSBTAP00000005998	zf-CCCH_2	PF14608	5.2e-06	2
ENSBTAP00000005998	zf-CCCH_2	PF14608	5.2e-06	3
ENSBTAP00000005998	zf-CCCH_2	PF14608	5.2e-06	4
ENSBTAP00000056802	zf-CCCH	PF00642	4.5e-09	1
ENSBTAP00000056802	zf-CCCH_2	PF14608	7.7e-06	2
ENSBTAP00000056802	zf-CCCH_2	PF14608	7.7e-06	3
ENSBTAP00000056802	zf-CCCH_2	PF14608	7.7e-06	4
ENSBTAP00000060055	zf-CCCH	PF00642	3.8e-10	1
ENSBTAP00000060055	zf-CCCH_2	PF14608	5.2e-06	2
ENSBTAP00000060055	zf-CCCH_2	PF14608	5.2e-06	3
ENSBTAP00000060055	zf-CCCH_2	PF14608	5.2e-06	4
ENSBTAP00000063207	zf-CCCH	PF00642	4e-09	1
ENSBTAP00000063207	zf-CCCH_2	PF14608	6.4e-06	2
ENSBTAP00000063207	zf-CCCH_2	PF14608	6.4e-06	3
ENSBTAP00000063207	zf-CCCH_2	PF14608	6.4e-06	4
ENSBTAP00000065135	zf-CCCH	PF00642	3.5e-09	1
ENSBTAP00000065135	zf-CCCH_2	PF14608	6.6e-06	2
ENSBTAP00000065135	zf-CCCH_2	PF14608	6.6e-06	3
ENSBTAP00000065135	zf-CCCH_2	PF14608	6.6e-06	4
ENSBTAP00000065483	zf-CCCH	PF00642	4.2e-09	1
ENSBTAP00000065483	zf-CCCH_2	PF14608	7.4e-06	2
ENSBTAP00000065483	zf-CCCH_2	PF14608	7.4e-06	3
ENSBTAP00000065483	zf-CCCH_2	PF14608	7.4e-06	4
ENSBTAP00000069356	zf-CCCH	PF00642	2.1e-10	1
ENSBTAP00000069356	zf-CCCH_2	PF14608	2.3e-06	2
ENSBTAP00000069356	zf-CCCH_2	PF14608	2.3e-06	3
ENSBTAP00000069356	zf-CCCH_2	PF14608	2.3e-06	4
ENSBTAP00000069445	zf-CCCH	PF00642	5.4e-09	1
ENSBTAP00000069445	zf-CCCH_2	PF14608	9.2e-06	2
ENSBTAP00000069445	zf-CCCH_2	PF14608	9.2e-06	3
ENSBTAP00000069445	zf-CCCH_2	PF14608	9.2e-06	4
ENSBTAP00000073997	zf-CCCH	PF00642	5.2e-10	1
ENSBTAP00000073997	zf-CCCH_2	PF14608	7.5e-06	2
ENSBTAP00000073997	zf-CCCH_2	PF14608	7.5e-06	3
ENSBTAP00000073997	zf-CCCH_2	PF14608	7.5e-06	4

Showing 1 to 36 of 36 entries

Pubmed ID	Full Name	Cell	Author	Time	Doi
No data available in table

Pubmed ID	Title	Author	Time	Journal
No data available in table

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
MBNL1-201	ENSBTAT00000077550	4083	422aa	ENSBTAP00000063207
MBNL1-202	ENSBTAT00000069762	4463	436aa	ENSBTAP00000069445
MBNL1-203	ENSBTAT00000084079	4409	418aa	ENSBTAP00000065483
MBNL1-204	ENSBTAT00000076435	4373	406aa	ENSBTAP00000065135
MBNL1-205	ENSBTAT00000073260	4352	399aa	ENSBTAP00000073997
MBNL1-206	ENSBTAT00000076665	4097	314aa	ENSBTAP00000069356
MBNL1-207	ENSBTAT00000005998	1532	369aa	ENSBTAP00000005998
MBNL1-208	ENSBTAT00000075577	2250	421aa	ENSBTAP00000056802
MBNL1-209	ENSBTAT00000068854	2048	371aa	ENSBTAP00000060055

Showing 1 to 9 of 9 entries

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Gene Model

Click here to download ENSBTAG00000004564's gene model file

ensgID	Trait	pValue	Pubmed ID
No data available in table

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID
No data available in table

Protein-Protein Interaction (PPI)

Click here to download ENSBTAG00000004564's PPI file

Paralogs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBTAG00000004564	bos_taurus	ENSBTAP00000018746	74.8663	62.2995	bos_taurus	ENSBTAP00000069445	64.2202	53.4404
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069651	75.9591	67.7749	bos_taurus	ENSBTAP00000069445	68.1193	60.7798
ENSBTAG00000004564	bos_taurus	ENSBTAP00000063845	27.3077	18.8462	bos_taurus	ENSBTAP00000069445	32.5688	22.4771

Showing 1 to 3 of 3 entries

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Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	91.055	91.055	ornithorhynchus_anatinus	ENSOANP00000048262	99.4987	99.4987
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	90.8257	90.367	sarcophilus_harrisii	ENSSHAP00000021686	99.2481	98.7469
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	71.5596	71.3303	notamacropus_eugenii	ENSMEUP00000006037	80.829	80.5699
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	55.7339	55.7339	choloepus_hoffmanni	ENSCHOP00000003391	73.8602	73.8602
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	91.5138	91.5138	dasypus_novemcinctus	ENSDNOP00000025006	100	100
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	88.5321	88.5321	erinaceus_europaeus	ENSEEUP00000008610	100	100
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	67.6606	67.4312	echinops_telfairi	ENSETEP00000013444	76.6234	76.3636
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	91.5138	91.5138	callithrix_jacchus	ENSCJAP00000056106	100	100
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	91.5138	91.5138	cercocebus_atys	ENSCATP00000040524	100	100
ENSBTAG00000004564	bos_taurus	ENSBTAP00000069445	91.5138	91.5138	macaca_fascicularis	ENSMFAP00000008573	100	100

Showing 1 to 10 of 287 entries

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Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression