RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBSLG00000016208	Gene ID	114858279	Accession	-
Symbol	qars1	Alias	-	Full Name	glutaminyl-tRNA synthetase 1
Status	Confidence	Length	5219 bases	Strand	Plus strand
Position	7 : 2057901 - 2063119	RNA binding domain	tRNA_synt_1c_R2 , tRNA_synt_1c_R1 , tRNA-synt_1c , tRNA-synt_1c_C
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSBSLP00000033683	tRNA_synt_1c_R2	PF04557	3.8e-23	1
ENSBSLP00000033683	tRNA_synt_1c_R1	PF04558	1.6e-52	2
ENSBSLP00000033683	tRNA-synt_1c	PF00749	1.8e-99	3
ENSBSLP00000033683	tRNA-synt_1c_C	PF03950	4.2e-49	4
ENSBSLP00000033763	tRNA_synt_1c_R2	PF04557	1.1e-21	1
ENSBSLP00000033763	tRNA_synt_1c_R1	PF04558	8.6e-54	2
ENSBSLP00000033763	tRNA-synt_1c	PF00749	2.1e-99	3
ENSBSLP00000033763	tRNA-synt_1c_C	PF03950	7.3e-49	4
ENSBSLP00000033806	tRNA_synt_1c_R2	PF04557	1.5e-24	1
ENSBSLP00000033806	tRNA_synt_1c_R1	PF04558	1.1e-52	2
ENSBSLP00000033806	tRNA-synt_1c	PF00749	1.3e-111	3
ENSBSLP00000033806	tRNA-synt_1c_C	PF03950	2.8e-46	4
ENSBSLP00000033989	tRNA_synt_1c_R2	PF04557	8.4e-23	1
ENSBSLP00000033989	tRNA_synt_1c_R1	PF04558	7.9e-54	2
ENSBSLP00000033989	tRNA-synt_1c	PF00749	2.3e-69	3
ENSBSLP00000033989	tRNA-synt_1c	PF00749	2.3e-69	4
ENSBSLP00000033989	tRNA-synt_1c_C	PF03950	5.8e-49	5
ENSBSLP00000034008	tRNA_synt_1c_R2	PF04557	4.7e-18	1
ENSBSLP00000034008	tRNA_synt_1c_R2	PF04557	4.7e-18	2
ENSBSLP00000034008	tRNA_synt_1c_R1	PF04558	8.1e-54	3
ENSBSLP00000034008	tRNA-synt_1c	PF00749	2.3e-69	4
ENSBSLP00000034008	tRNA-synt_1c	PF00749	2.3e-69	5
ENSBSLP00000034008	tRNA-synt_1c_C	PF03950	5.7e-49	6
ENSBSLP00000034024	tRNA_synt_1c_R2	PF04557	3e-17	1
ENSBSLP00000034024	tRNA_synt_1c_R2	PF04557	3e-17	2
ENSBSLP00000034024	tRNA_synt_1c_R1	PF04558	8e-54	3
ENSBSLP00000034024	tRNA-synt_1c	PF00749	2.3e-69	4
ENSBSLP00000034024	tRNA-synt_1c	PF00749	2.3e-69	5
ENSBSLP00000034024	tRNA-synt_1c_C	PF03950	5.9e-49	6
ENSBSLP00000034036	tRNA_synt_1c_R2	PF04557	1.1e-21	1
ENSBSLP00000034036	tRNA_synt_1c_R1	PF04558	6.4e-54	2
ENSBSLP00000034036	tRNA-synt_1c	PF00749	2e-69	3
ENSBSLP00000034036	tRNA-synt_1c	PF00749	2e-69	4
ENSBSLP00000034036	tRNA-synt_1c_C	PF03950	6e-34	5

Showing 1 to 34 of 34 entries

Pubmed ID	Full Name	Cell	Author	Time	Doi
No data available in table

Pubmed ID	Title	Author	Time	Journal
No data available in table

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
qars1-201	ENSBSLT00000037268	2277	758aa	ENSBSLP00000033683
qars1-202	ENSBSLT00000037350	2295	764aa	ENSBSLP00000033763
qars1-203	ENSBSLT00000037399	2280	759aa	ENSBSLP00000033806
qars1-204	ENSBSLT00000037595	2181	726aa	ENSBSLP00000033989
qars1-205	ENSBSLT00000037614	2145	714aa	ENSBSLP00000034008
qars1-206	ENSBSLT00000037630	2118	705aa	ENSBSLP00000034024
qars1-207	ENSBSLT00000037642	2073	690aa	ENSBSLP00000034036

Showing 1 to 7 of 7 entries

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Gene Model

Click here to download ENSBSLG00000016208's gene model file

ensgID	Trait	pValue	Pubmed ID
No data available in table

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID
No data available in table

Protein-Protein Interaction (PPI)

Click here to download ENSBSLG00000016208's PPI file

Paralogs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000016208	betta_splendens	ENSBSLP00000043140	19.5986	11.6883	betta_splendens	ENSBSLP00000033763	43.4555	25.9162
ENSBSLG00000016208	betta_splendens	ENSBSLP00000003570	30.4673	18.1308	betta_splendens	ENSBSLP00000033763	21.3351	12.6963

Showing 1 to 2 of 2 entries

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Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	91.2304	83.7696	fundulus_heteroclitus	ENSFHEP00000002763	89.704	82.3681
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	87.5654	80.8901	poecilia_reticulata	ENSPREP00000024161	91.0204	84.0816
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	91.2304	84.2932	xiphophorus_maculatus	ENSXMAP00000015975	89.8196	82.9897
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	91.8848	84.555	oryzias_latipes	ENSORLP00000013469	90.6977	83.4625
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	91.4921	83.6387	cyclopterus_lumpus	ENSCLMP00005007592	90.0773	82.3454
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	93.0628	86.1257	oreochromis_niloticus	ENSONIP00000070271	91.6237	84.7938
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	91.623	84.8168	sparus_aurata	ENSSAUP00010043278	90.4393	83.7209
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	93.1937	85.733	haplochromis_burtoni	ENSHBUP00000025019	91.7526	84.4072
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	93.7173	88.8743	lates_calcarifer	ENSLCAP00010039980	92.268	87.5
ENSBSLG00000016208	betta_splendens	ENSBSLP00000033763	91.623	84.4241	cyprinodon_variegatus	ENSCVAP00000026490	90.2062	83.1186

Showing 1 to 10 of 207 entries

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Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression