RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBSLG00000014809	Gene ID		Accession	-
Symbol	gig2p	Alias	-	Full Name	grass carp reovirus (GCRV)-induced gene 2p
Status	Confidence	Length	4215 bases	Strand	Minus strand
Position	9 : 19330843 - 19335057	RNA binding domain	PARP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBSLP00000029763	PARP	PF00644	5.9e-16	1
ENSBSLP00000029763	PARP	PF00644	5.9e-16	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
gig2p-201	ENSBSLT00000032995	906	301aa	ENSBSLP00000029763

Gene Model

Click here to download ENSBSLG00000014809's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBSLG00000014809's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000014809

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	51.1628	37.8738	fundulus_heteroclitus	ENSFHEP00000016059	63.3745	46.9136
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	47.1761	33.887	poecilia_reticulata	ENSPREP00000007685	65.4378	47.0046
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	49.5017	35.8804	xiphophorus_maculatus	ENSXMAP00000019491	66.8161	48.4305
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	47.1761	36.5448	oryzias_latipes	ENSORLP00000028819	68.599	53.1401
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	49.8339	38.5382	cyclopterus_lumpus	ENSCLMP00005046268	42.4929	32.8612
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	49.1694	38.5382	oreochromis_niloticus	ENSONIP00000074471	66.3677	52.0179
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	65.7807	54.4851	oreochromis_niloticus	ENSONIP00000014886	68.0412	56.3574
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.186	36.8771	astatotilapia_calliptera	ENSACLP00000009461	60.181	50.2262
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	51.495	40.1993	sparus_aurata	ENSSAUP00010056932	66.8103	52.1552
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	33.887	26.2458	sparus_aurata	ENSSAUP00010056930	70.3448	54.4828
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	42.8571	35.5482	haplochromis_burtoni	ENSHBUP00000027327	73.7143	61.1429
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.186	38.8704	lates_calcarifer	ENSLCAP00010059844	73.4807	64.6409
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	46.8439	39.5349	lates_calcarifer	ENSLCAP00010059846	59.2437	50
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	43.8538	34.2193	cyprinodon_variegatus	ENSCVAP00000023483	63.7681	49.7585
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	40.5316	30.2326	oryzias_melastigma	ENSOMEP00000025848	69.7143	52
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	38.8704	31.8937	takifugu_rubripes	ENSTRUP00000054306	40.625	33.3333
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	50.1661	38.206	kryptolebias_marmoratus	ENSKMAP00000010549	66.8142	50.885
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	36.8771	31.2292	dicentrarchus_labrax	ENSDLAP00005012929	78.169	66.1972
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	46.5116	36.5448	dicentrarchus_labrax	ENSDLAP00005072877	60.8696	47.8261
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	47.5083	37.2093	seriola_dumerili	ENSSDUP00000024879	67.4528	52.8302
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	49.8339	37.8738	labrus_bergylta	ENSLBEP00000024508	67.8733	51.5837
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	39.8671	33.5548	scophthalmus_maximus	ENSSMAP00000013573	41.2371	34.7079
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	40.1993	33.2226	amphilophus_citrinellus	ENSACIP00000008843	75.625	62.5
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	48.8372	36.2126	poecilia_formosa	ENSPFOP00000006060	58.3333	43.254
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	47.8405	35.8804	cottoperca_gobio	ENSCGOP00000015605	41.1429	30.8571
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	46.1794	36.5448	acanthochromis_polyacanthus	ENSAPOP00000001115	64.0553	50.6912
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	25.5814	22.2591	gasterosteus_aculeatus	ENSGACP00000013784	88.5057	77.0115
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	39.8671	32.2259	amphiprion_ocellaris	ENSAOCP00000019796	67.7966	54.8023
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	51.1628	40.5316	sander_lucioperca	ENSSLUP00000026802	45.8333	36.3095
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	49.1694	38.5382	seriola_lalandi_dorsalis	ENSSLDP00000023528	66.0714	51.7857
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	46.5116	35.2159	stegastes_partitus	ENSSPAP00000006863	61.1354	46.2882
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	48.505	38.8704	anabas_testudineus	ENSATEP00000004592	71.9212	57.6355
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	76.412	64.4518	anabas_testudineus	ENSATEP00000069224	41.5162	35.0181
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.186	37.2093	larimichthys_crocea	ENSLCRP00005055229	76.8786	64.7399
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	58.1395	46.5116	oryzias_sinensis	ENSOSIP00000047984	54.0123	43.2099
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	50.4983	37.8738	oryzias_javanicus	ENSOJAP00000002496	40.9704	30.7278
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	43.5216	34.2193	amphiprion_percula	ENSAPEP00000024315	62.0853	48.8152
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	41.196	35.2159	pundamilia_nyererei	ENSPNYP00000028178	69.6629	59.5506
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	42.8571	35.5482	neolamprologus_brichardi	ENSNBRP00000001044	73.2955	60.7955
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	50.1661	39.2027	mastacembelus_armatus	ENSMAMP00000016652	68.018	53.1532
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	49.5017	38.8704	maylandia_zebra	ENSMZEP00005018402	64.2241	50.431
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	31.5615	23.588	petromyzon_marinus	ENSPMAP00000011313	61.2903	45.8064
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	32.8904	23.9203	petromyzon_marinus	ENSPMAP00000006229	35.1064	25.5319
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	48.1728	35.5482	petromyzon_marinus	ENSPMAP00000008033	54.9242	40.5303
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.5183	31.8937	latimeria_chalumnae	ENSLACP00000018026	62.9108	45.0704
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	42.8571	33.2226	lepisosteus_oculatus	ENSLOCP00000021962	60.2804	46.729
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	59.4684	47.1761	clupea_harengus	ENSCHAP00000059141	61.0922	48.4642
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	43.1894	31.8937	danio_rerio	ENSDARP00000114068	59.3607	43.8356
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	43.8538	32.2259	astyanax_mexicanus	ENSAMXP00000025893	60.5505	44.4954
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.5183	31.5615	carassius_auratus	ENSCARP00000019076	62.9108	44.6009
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	43.8538	32.5581	carassius_auratus	ENSCARP00000007813	61.3953	45.5814
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	42.8571	32.2259	ictalurus_punctatus	ENSIPUP00000033543	59.1743	44.4954
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	37.2093	26.9103	electrophorus_electricus	ENSEEEP00000038932	56	40.5
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	45.8472	34.5515	esox_lucius	ENSELUP00000017850	41.8182	31.5152
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	40.8638	32.5581	oncorhynchus_kisutch	ENSOKIP00005003013	59.7087	47.5728
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	43.5216	32.5581	oncorhynchus_mykiss	ENSOMYP00000079219	63.5922	47.5728
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.8505	34.5515	salmo_salar	ENSSSAP00000145349	59.7345	46.0177
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	39.8671	32.2259	salmo_trutta	ENSSTUP00000093451	59.4059	48.0198
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	40.5316	29.9003	erpetoichthys_calabaricus	ENSECRP00000020130	55.4545	40.9091
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.5183	33.2226	pygocentrus_nattereri	ENSPNAP00000028973	61.7512	46.083
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	46.1794	34.8837	hucho_hucho	ENSHHUP00000012774	61.7778	46.6667
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.186	32.5581	sinocyclocheilus_grahami	ENSSGRP00000024093	61.2903	45.1613
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.186	32.2259	oncorhynchus_tshawytscha	ENSOTSP00005022081	63.6364	46.4115
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	42.8571	32.8904	scleropages_formosus	ENSSFOP00015015322	59.7222	45.8333
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	36.5448	27.907	denticeps_clupeoides	ENSDCDP00000017514	66.6667	50.9091
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	49.5017	36.8771	myripristis_murdjan	ENSMMDP00005024549	62.3431	46.4435
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.186	31.8937	cyprinus_carpio_carpio	ENSCCRP00000059168	57.3276	41.3793
ENSBSLG00000014809	betta_splendens	ENSBSLP00000029763	44.186	32.5581	cyprinus_carpio_carpio	ENSCCRP00000103169	43.0421	31.7152

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression