RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBSLG00000010735	Gene ID	114854605	Accession	-
Symbol	si	Alias	-	Full Name	uncharacterized LOC114854605
Status	Confidence	Length	1709 bases	Strand	Plus strand
Position	4 : 27257216 - 27258924	RNA binding domain	Isy1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBSLP00000020891	Isy1	PF06246	5.1e-09	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
si:dkey-86e18.1-201	ENSBSLT00000023377	977	296aa	ENSBSLP00000020891
si:dkey-86e18.1-202	ENSBSLT00000023407	1058	323aa	ENSBSLP00000020917

Gene Model

Click here to download ENSBSLG00000010735's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBSLG00000010735's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000010735

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	56.9659	47.3684	fundulus_heteroclitus	ENSFHEP00000000223	59.7403	49.6753
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	51.3932	42.4149	poecilia_reticulata	ENSPREP00000002880	52.3659	43.2177
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	56.9659	48.2972	xiphophorus_maculatus	ENSXMAP00000011423	60.5263	51.3158
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	53.87	44.2724	oryzias_latipes	ENSORLP00000026499	56.8627	46.732
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	39.9381	33.1269	cyclopterus_lumpus	ENSCLMP00005026862	60	49.7674
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	47.0588	38.6997	cyclopterus_lumpus	ENSCLMP00005026866	65.8009	54.1126
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	58.2043	47.678	oreochromis_niloticus	ENSONIP00000040749	66.4311	54.417
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	60.0619	48.9164	astatotilapia_calliptera	ENSACLP00000017991	67.8322	55.2448
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	59.1331	49.8452	sparus_aurata	ENSSAUP00010020899	64.7458	54.5763
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	59.7523	48.6068	haplochromis_burtoni	ENSHBUP00000016294	67.4825	54.8951
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	55.1084	49.8452	lates_calcarifer	ENSLCAP00010017655	70.9163	64.1434
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	55.7276	45.2012	cyprinodon_variegatus	ENSCVAP00000031087	51.1364	41.4773
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	55.1084	43.6533	oryzias_melastigma	ENSOMEP00000000888	58.7459	46.5347
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	52.0124	44.582	takifugu_rubripes	ENSTRUP00000058398	60.8696	52.1739
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	61.3003	50.4644	kryptolebias_marmoratus	ENSKMAP00000011161	64.4951	53.0945
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	63.7771	54.4892	dicentrarchus_labrax	ENSDLAP00005004196	58.8571	50.2857
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	64.3963	56.0372	seriola_dumerili	ENSSDUP00000000995	65.4088	56.9182
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	54.7988	42.7245	labrus_bergylta	ENSLBEP00000010421	63.8989	49.8195
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	60.9907	52.322	scophthalmus_maximus	ENSSMAP00000028848	63.141	54.1667
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	56.3467	47.678	poecilia_latipinna	ENSPLAP00000007541	59.8684	50.6579
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	55.1084	47.678	amphilophus_citrinellus	ENSACIP00000010036	71.2	61.6
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	56.3467	47.9876	poecilia_formosa	ENSPFOP00000014508	59.8684	50.9868
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	63.7771	54.4892	cottoperca_gobio	ENSCGOP00000003309	65.1899	55.6962
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	62.8483	52.9412	acanthochromis_polyacanthus	ENSAPOP00000001501	64.4444	54.2857
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	56.3467	48.9164	amphiprion_ocellaris	ENSAOCP00000010212	73.3871	63.7097
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	46.4396	36.8421	hippocampus_comes	ENSHCOP00000014560	56.6038	44.9057
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	62.2291	54.1796	sander_lucioperca	ENSSLUP00000051989	65.9016	57.377
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	64.0867	55.1084	seriola_lalandi_dorsalis	ENSSLDP00000000253	64.8903	55.7994
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	60.6811	52.6316	stegastes_partitus	ENSSPAP00000019487	63.6364	55.1948
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	59.4427	53.5604	anabas_testudineus	ENSATEP00000026044	64.6465	58.2492
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	63.1579	53.5604	larimichthys_crocea	ENSLCRP00005048956	62.5767	53.0675
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	53.87	44.582	oryzias_sinensis	ENSOSIP00000010002	56.8627	47.0588
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	55.1084	45.2012	oryzias_javanicus	ENSOJAP00000008950	58.5526	48.0263
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	52.6316	43.0341	cynoglossus_semilaevis	ENSCSEP00000011614	58.8235	48.0969
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	61.3003	52.0124	amphiprion_percula	ENSAPEP00000016554	65.1316	55.2632
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	56.6563	48.2972	nothobranchius_furzeri	ENSNFUP00015040707	60.396	51.4851
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	60.0619	48.9164	pundamilia_nyererei	ENSPNYP00000009840	67.8322	55.2448
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	53.2508	44.2724	neolamprologus_brichardi	ENSNBRP00000031082	69.0763	57.4297
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	61.9195	53.87	mastacembelus_armatus	ENSMAMP00000063006	63.4921	55.2381
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	60.0619	48.9164	maylandia_zebra	ENSMZEP00005026075	67.8322	55.2448
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	34.6749	24.4582	callorhinchus_milii	ENSCMIP00000047508	53.0806	37.4408
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	42.4149	30.3406	latimeria_chalumnae	ENSLACP00000004415	49.8182	35.6364
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	47.3684	35.2941	lepisosteus_oculatus	ENSLOCP00000010842	58.6207	43.6782
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	47.0588	36.8421	danio_rerio	ENSDARP00000063916	59.375	46.4844
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	47.3684	37.1517	astyanax_mexicanus	ENSAMXP00000038881	53.125	41.6667
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	43.3437	35.2941	carassius_auratus	ENSCARP00000109213	52.2388	42.5373
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	44.2724	35.2941	ictalurus_punctatus	ENSIPUP00000018012	55	43.8462
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	49.226	40.5573	esox_lucius	ENSELUP00000006344	53.3557	43.9597
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	52.0124	42.1053	oncorhynchus_kisutch	ENSOKIP00005032665	46.9274	37.9888
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	46.7492	37.7709	oncorhynchus_mykiss	ENSOMYP00000069877	61.6327	49.7959
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	51.3932	41.1765	salmo_salar	ENSSSAP00000056768	56.6553	45.3925
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	52.322	42.1053	salmo_trutta	ENSSTUP00000005012	57.6792	46.4164
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	37.4613	30.3406	gadus_morhua	ENSGMOP00000022898	57.0755	46.2264
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	40.2477	27.8638	erpetoichthys_calabaricus	ENSECRP00000025919	46.0993	31.9149
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	46.7492	39.0093	pygocentrus_nattereri	ENSPNAP00000023490	58.5271	48.8372
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	51.0836	41.1765	hucho_hucho	ENSHHUP00000054092	55.7432	44.9324
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	38.0805	29.7214	sinocyclocheilus_grahami	ENSSGRP00000006548	55.157	43.0493
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	44.2724	35.6037	sinocyclocheilus_grahami	ENSSGRP00000069853	53.3582	42.9104
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	51.7028	42.1053	oncorhynchus_tshawytscha	ENSOTSP00005079409	56.9966	46.4164
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	39.9381	31.5789	paramormyrops_kingsleyae	ENSPKIP00000027532	54.661	43.2203
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	41.1765	29.7214	leptobrachium_leishanense	ENSLLEP00000045358	51.5504	37.2093
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	46.13	33.7461	scleropages_formosus	ENSSFOP00015041684	54.1818	39.6364
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	46.13	33.7461	scleropages_formosus	ENSSFOP00015050610	54.1818	39.6364
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	57.8947	47.9876	myripristis_murdjan	ENSMMDP00005029580	52.8249	43.7853
ENSBSLG00000010735	betta_splendens	ENSBSLP00000020917	43.6533	36.2229	cyprinus_carpio_carpio	ENSCCRP00000103366	52.809	43.8202

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression