RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBSLG00000007538	Gene ID	114842116	Accession	-
Symbol		Alias	-	Full Name	interferon-induced, double-stranded RNA-activated protein kinase-like
Status	Confidence	Length	9384 bases	Strand	Minus strand
Position	15 : 8149965 - 8159348	RNA binding domain	dsrm
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBSLP00000014386	dsrm	PF00035	3.5e-45	1
ENSBSLP00000014386	dsrm	PF00035	3.5e-45	2
ENSBSLP00000014386	dsrm	PF00035	3.5e-45	3
ENSBSLP00000014323	dsrm	PF00035	4.1e-45	1
ENSBSLP00000014323	dsrm	PF00035	4.1e-45	2
ENSBSLP00000014323	dsrm	PF00035	4.1e-45	3
ENSBSLP00000014341	dsrm	PF00035	5.4e-45	1
ENSBSLP00000014341	dsrm	PF00035	5.4e-45	2
ENSBSLP00000014341	dsrm	PF00035	5.4e-45	3
ENSBSLP00000014370	dsrm	PF00035	6.3e-45	1
ENSBSLP00000014370	dsrm	PF00035	6.3e-45	2
ENSBSLP00000014370	dsrm	PF00035	6.3e-45	3
ENSBSLP00000014392	dsrm	PF00035	4.2e-40	1
ENSBSLP00000014392	dsrm	PF00035	4.2e-40	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBSLT00000016263	2763	645aa	ENSBSLP00000014323
-	ENSBSLT00000016282	2707	662aa	ENSBSLP00000014341
-	ENSBSLT00000016312	2614	690aa	ENSBSLP00000014370
-	ENSBSLT00000016329	2368	608aa	ENSBSLP00000014386
-	ENSBSLT00000016336	2296	584aa	ENSBSLP00000014392

Gene Model

Click here to download ENSBSLG00000007538's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBSLG00000007538's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014213	61.082	42.4084	betta_splendens	ENSBSLP00000014370	50.7246	35.2174
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014226	71.6535	56.6929	betta_splendens	ENSBSLP00000014370	26.3768	20.8696
ENSBSLG00000007538	betta_splendens	ENSBSLP00000000717	35.2357	20.5955	betta_splendens	ENSBSLP00000014370	20.5797	12.029
ENSBSLG00000007538	betta_splendens	ENSBSLP00000028178	35.3511	19.8547	betta_splendens	ENSBSLP00000014370	21.1594	11.8841
ENSBSLG00000007538	betta_splendens	ENSBSLP00000056483	35.2357	20.5955	betta_splendens	ENSBSLP00000014370	20.5797	12.029
ENSBSLG00000007538	betta_splendens	ENSBSLP00000045316	31.7147	19.7269	betta_splendens	ENSBSLP00000014370	30.2899	18.8406
ENSBSLG00000007538	betta_splendens	ENSBSLP00000021806	26.6914	15.848	betta_splendens	ENSBSLP00000014370	41.7391	24.7826
ENSBSLG00000007538	betta_splendens	ENSBSLP00000020747	31.6327	18.8776	betta_splendens	ENSBSLP00000014370	17.971	10.7246
ENSBSLG00000007538	betta_splendens	ENSBSLP00000047475	31.6271	19.1956	betta_splendens	ENSBSLP00000014370	25.0725	15.2174
ENSBSLG00000007538	betta_splendens	ENSBSLP00000029306	37.5367	23.1672	betta_splendens	ENSBSLP00000014370	18.5507	11.4493
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014400	41.2088	29.1209	betta_splendens	ENSBSLP00000014370	10.8696	7.68116
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014284	65.8301	51.1583	betta_splendens	ENSBSLP00000014370	49.4203	38.4058
ENSBSLG00000007538	betta_splendens	ENSBSLP00000037914	26.3158	15.6197	betta_splendens	ENSBSLP00000014370	22.4638	13.3333
ENSBSLG00000007538	betta_splendens	ENSBSLP00000040582	28.5486	18.0223	betta_splendens	ENSBSLP00000014370	25.942	16.3768
ENSBSLG00000007538	betta_splendens	ENSBSLP00000035333	18.1931	9.96287	betta_splendens	ENSBSLP00000014370	42.6087	23.3333

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	67.1014	54.058	sparus_aurata	ENSSAUP00010026408	74.7981	60.2585
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	70.1449	57.6812	lates_calcarifer	ENSLCAP00010011658	75.507	62.0905
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	76.087	63.3333	dicentrarchus_labrax	ENSDLAP00005059462	75.5396	62.8777
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	78.5507	66.3768	seriola_dumerili	ENSSDUP00000003789	77.3181	65.3352
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	68.8406	56.6667	amphilophus_citrinellus	ENSACIP00000009045	71.9697	59.2424
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	60.8696	51.0145	cottoperca_gobio	ENSCGOP00000028217	74.8663	62.7451
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	76.9565	62.1739	acanthochromis_polyacanthus	ENSAPOP00000008512	75.641	61.1111
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	54.4928	43.4783	gasterosteus_aculeatus	ENSGACP00000005752	68.9908	55.0459
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	77.1014	62.3188	amphiprion_ocellaris	ENSAOCP00000000557	75.5682	61.0795
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	59.5652	44.2029	hippocampus_comes	ENSHCOP00000008209	67.4877	50.0821
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	63.7681	52.7536	sander_lucioperca	ENSSLUP00000010754	74.7029	61.7997
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	78.5507	66.087	seriola_lalandi_dorsalis	ENSSLDP00000032423	77.3181	65.0499
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	78.6957	68.5507	anabas_testudineus	ENSATEP00000022378	78.6957	68.5507
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	77.1014	64.2029	larimichthys_crocea	ENSLCRP00005007878	75.8916	63.1954
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	71.7391	57.6812	amphiprion_percula	ENSAPEP00000033389	76.9829	61.8974
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	40.8696	32.4638	amphiprion_percula	ENSAPEP00000033518	78.5515	62.3955
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	40.8696	32.4638	amphiprion_percula	ENSAPEP00000033444	78.5515	62.3955
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	21.5942	16.8116	amphiprion_percula	ENSAPEP00000033551	80.9783	63.0435
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	70.2899	56.5217	neolamprologus_brichardi	ENSNBRP00000015842	72.1726	58.0357
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	29.7101	25.3623	mastacembelus_armatus	ENSMAMP00000025757	78.5441	67.0498
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	71.1594	60.2899	mastacembelus_armatus	ENSMAMP00000025880	78.4345	66.4537
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	20.5797	13.4783	caenorhabditis_elegans	Y38E10A.8.1	49.1349	32.1799
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	35.2174	20.8696	caenorhabditis_elegans	F46C3.1.1	22.5627	13.3705
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	42.4638	24.058	drosophila_melanogaster	FBpp0078417	25.2151	14.2857
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	30.5797	18.4058	ciona_intestinalis	ENSCINP00000025661	38.5037	23.1752
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	38.9855	22.8986	petromyzon_marinus	ENSPMAP00000006894	26.7928	15.7371
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	29.8551	20.4348	callorhinchus_milii	ENSCMIP00000018274	45.4746	31.1258
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	25.942	18.1159	latimeria_chalumnae	ENSLACP00000007014	61.3014	42.8082
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	58.4058	42.6087	clupea_harengus	ENSCHAP00000021887	60.1493	43.8806
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	58.9855	42.6087	danio_rerio	ENSDARP00000133369	59.6774	43.1085
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	52.1739	37.3913	astyanax_mexicanus	ENSAMXP00000032607	60.1002	43.0718
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	53.7681	37.5362	carassius_auratus	ENSCARP00000039522	56.8147	39.6631
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	56.2319	38.9855	carassius_auratus	ENSCARP00000017449	58.6103	40.6344
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	54.9275	38.2609	carassius_auratus	ENSCARP00000017925	60.0634	41.8384
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	58.5507	42.1739	ictalurus_punctatus	ENSIPUP00000029486	59.4993	42.8571
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	57.971	40.1449	electrophorus_electricus	ENSEEEP00000008821	57.3888	39.7417
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	64.7826	46.3768	esox_lucius	ENSELUP00000018611	68.4533	49.0046
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	22.7536	18.6957	esox_lucius	ENSELUP00000070976	67.382	55.3648
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	65.5072	48.2609	oncorhynchus_kisutch	ENSOKIP00005063432	62.3448	45.931
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	63.913	47.6812	oncorhynchus_mykiss	ENSOMYP00000108606	57.874	43.1759
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	64.9275	47.971	salmo_salar	ENSSSAP00000158651	42.344	31.2854
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	65.942	48.9855	salmo_trutta	ENSSTUP00000076888	62.586	46.4924
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	56.5217	39.8551	gadus_morhua	ENSGMOP00000020208	57.6923	40.6805
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	38.6957	25.2174	xenopus_tropicalis	ENSXETP00000110867	50	32.5843
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	8.98551	6.95652	sphenodon_punctatus	ENSSPUP00000019272	62	48
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	34.4928	21.7391	erpetoichthys_calabaricus	ENSECRP00000025863	36.2253	22.8311
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	59.1304	40.5797	pygocentrus_nattereri	ENSPNAP00000000958	59.4752	40.8163
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	30.1449	18.2609	ciona_savignyi	ENSCSAVP00000013204	37.0107	22.4199
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	29.2754	19.2754	hucho_hucho	ENSHHUP00000007948	40.481	26.6533
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	41.7391	29.1304	sinocyclocheilus_grahami	ENSSGRP00000058024	58.5366	40.8537
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	53.7681	37.5362	sinocyclocheilus_grahami	ENSSGRP00000017384	58.9825	41.1765
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	19.2754	14.058	sinocyclocheilus_grahami	ENSSGRP00000058025	52.5692	38.3399
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	48.6957	33.913	sinocyclocheilus_grahami	ENSSGRP00000058020	56.3758	39.2617
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	28.5507	22.7536	oncorhynchus_tshawytscha	ENSOTSP00005003326	74.9049	59.6958
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	55.942	41.3043	paramormyrops_kingsleyae	ENSPKIP00000008618	59.66	44.0495
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	37.971	25.6522	leptobrachium_leishanense	ENSLLEP00000009829	43.594	29.4509
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	29.8551	20	scleropages_formosus	ENSSFOP00015062435	46.1883	30.9417
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	31.5942	22.1739	denticeps_clupeoides	ENSDCDP00000057256	46.383	32.5532
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	67.5362	52.3188	myripristis_murdjan	ENSMMDP00005043986	68.2284	52.8551
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	36.087	27.6812	myripristis_murdjan	ENSMMDP00005044065	71.1429	54.5714
ENSBSLG00000007538	betta_splendens	ENSBSLP00000014370	30.2899	19.8551	cyprinus_carpio_carpio	ENSCCRP00000018622	42.7403	28.0164

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression