RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBSLG00000007228	Gene ID	114861637	Accession	-
Symbol		Alias	-	Full Name	protein mono-ADP-ribosyltransferase PARP12-like
Status	Confidence	Length	8072 bases	Strand	Minus strand
Position	9 : 4557784 - 4565855	RNA binding domain	PARP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBSLP00000013685	PARP	PF00644	1.8e-35	1
ENSBSLP00000013703	PARP	PF00644	2e-35	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBSLT00000015482	3553	872aa	ENSBSLP00000013685
-	ENSBSLT00000015504	3679	914aa	ENSBSLP00000013703

Gene Model

Click here to download ENSBSLG00000007228's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBSLG00000007228's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000007228	betta_splendens	ENSBSLP00000051890	35.7771	18.4751	betta_splendens	ENSBSLP00000013703	13.3479	6.89278
ENSBSLG00000007228	betta_splendens	ENSBSLP00000051903	19.0476	8.44156	betta_splendens	ENSBSLP00000013703	9.62801	4.26696
ENSBSLG00000007228	betta_splendens	ENSBSLP00000049340	31.8741	19.5622	betta_splendens	ENSBSLP00000013703	25.4923	15.6455
ENSBSLG00000007228	betta_splendens	ENSBSLP00000008215	7.71574	3.5533	betta_splendens	ENSBSLP00000013703	8.3151	3.82932
ENSBSLG00000007228	betta_splendens	ENSBSLP00000056838	34.7732	20.9503	betta_splendens	ENSBSLP00000013703	17.6149	10.6127
ENSBSLG00000007228	betta_splendens	ENSBSLP00000056833	39.8305	24.2938	betta_splendens	ENSBSLP00000013703	15.4267	9.40919
ENSBSLG00000007228	betta_splendens	ENSBSLP00000038810	17.5926	7.71605	betta_splendens	ENSBSLP00000013703	6.23632	2.73523
ENSBSLG00000007228	betta_splendens	ENSBSLP00000038829	15.3061	7.82313	betta_splendens	ENSBSLP00000013703	4.92341	2.51641
ENSBSLG00000007228	betta_splendens	ENSBSLP00000020958	30.4688	18.75	betta_splendens	ENSBSLP00000013703	12.8009	7.87746
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013863	49.2135	31.236	betta_splendens	ENSBSLP00000013703	23.9606	15.2079
ENSBSLG00000007228	betta_splendens	ENSBSLP00000038858	32.0225	19.382	betta_splendens	ENSBSLP00000013703	12.4726	7.54923
ENSBSLG00000007228	betta_splendens	ENSBSLP00000010643	14.9155	8.44967	betta_splendens	ENSBSLP00000013703	22.2101	12.5821
ENSBSLG00000007228	betta_splendens	ENSBSLP00000031118	18.5053	9.96441	betta_splendens	ENSBSLP00000013703	5.68928	3.06346
ENSBSLG00000007228	betta_splendens	ENSBSLP00000051961	14.4382	7.97753	betta_splendens	ENSBSLP00000013703	28.1182	15.5361
ENSBSLG00000007228	betta_splendens	ENSBSLP00000037872	51.7451	38.3915	betta_splendens	ENSBSLP00000013703	37.3085	27.6805

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	51.3129	42.0131	fundulus_heteroclitus	ENSFHEP00000014861	58.9937	48.3019
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	63.0197	50.9847	xiphophorus_maculatus	ENSXMAP00000028809	64.4295	52.1253
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	68.5996	54.5952	oryzias_latipes	ENSORLP00000011501	61.7126	49.1142
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	63.6761	50.9847	cyclopterus_lumpus	ENSCLMP00005046661	68.6321	54.9528
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	68.8184	55.7987	oreochromis_niloticus	ENSONIP00000080393	65.6576	53.2359
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	63.6761	50	astatotilapia_calliptera	ENSACLP00000012309	69.1211	54.2755
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	50.3282	39.7155	astatotilapia_calliptera	ENSACLP00000012285	69.2771	54.6687
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	69.4748	56.0175	astatotilapia_calliptera	ENSACLP00000012327	70.7127	57.0156
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	69.6937	58.2057	sparus_aurata	ENSSAUP00010063567	62.0253	51.8014
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	63.4573	52.1882	haplochromis_burtoni	ENSHBUP00000009806	72.5	59.625
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	77.0241	66.6302	lates_calcarifer	ENSLCAP00010019412	74.1833	64.1728
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	67.0678	52.2976	oryzias_melastigma	ENSOMEP00000021477	66.4859	51.8438
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	57.9869	43.9825	takifugu_rubripes	ENSTRUP00000064293	50.2846	38.1404
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	40.4814	32.6039	kryptolebias_marmoratus	ENSKMAP00000024442	73.5586	59.2445
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	66.1926	52.1882	kryptolebias_marmoratus	ENSKMAP00000004002	61.609	48.5743
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	70.7877	59.628	dicentrarchus_labrax	ENSDLAP00005048879	71.0989	59.8901
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	65.8643	55.7987	seriola_dumerili	ENSSDUP00000019437	79.4195	67.2823
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	64.6608	53.0635	labrus_bergylta	ENSLBEP00000037055	69.6934	57.1934
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	69.1466	57.1116	scophthalmus_maximus	ENSSMAP00000023364	67.957	56.129
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	62.8009	50.547	poecilia_latipinna	ENSPLAP00000001035	62.1212	50
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	56.8928	46.6083	amphilophus_citrinellus	ENSACIP00000009723	74.7126	61.2069
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	39.6061	30.3063	amphilophus_citrinellus	ENSACIP00000009621	61.4601	47.0289
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	58.0963	46.4989	amphilophus_citrinellus	ENSACIP00000009584	75.5334	60.4552
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	35.6674	28.9934	amphilophus_citrinellus	ENSACIP00000009481	75.9907	61.7716
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	59.2998	47.7024	poecilia_formosa	ENSPFOP00000009230	62.2989	50.1149
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	44.9672	37.6368	poecilia_formosa	ENSPFOP00000009007	72.8723	60.9929
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	58.9716	48.0306	cottoperca_gobio	ENSCGOP00000023309	71.2021	57.9921
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	66.9584	53.3917	acanthochromis_polyacanthus	ENSAPOP00000029473	69.0745	55.079
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	59.628	48.0306	gasterosteus_aculeatus	ENSGACP00000025288	70.5045	56.7917
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	62.1444	49.3435	amphiprion_ocellaris	ENSAOCP00000029760	65.3625	51.8987
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	45.8424	37.1991	tetraodon_nigroviridis	ENSTNIP00000009710	73.8977	59.9647
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	70.8972	59.9562	sander_lucioperca	ENSSLUP00000033565	67.2897	56.9055
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	44.4201	37.5274	sander_lucioperca	ENSSLUP00000033695	69.1652	58.4327
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	58.6433	49.1247	seriola_lalandi_dorsalis	ENSSLDP00000016994	74.1355	62.1024
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	67.6149	54.7046	stegastes_partitus	ENSSPAP00000027368	68.9732	55.8036
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	69.3654	61.8162	anabas_testudineus	ENSATEP00000007110	74.2389	66.1592
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	71.116	56.7834	larimichthys_crocea	ENSLCRP00005024691	74.3707	59.3822
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	67.1772	53.7199	oryzias_sinensis	ENSOSIP00000019458	65.8092	52.6259
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	65.5361	51.9694	oryzias_javanicus	ENSOJAP00000013984	67.0773	53.1915
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	59.9562	47.4836	cynoglossus_semilaevis	ENSCSEP00000024747	61.229	48.4916
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	67.9431	54.0481	amphiprion_percula	ENSAPEP00000025703	66.0638	52.5532
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	65.3173	51.6411	nothobranchius_furzeri	ENSNFUP00015039515	62.2523	49.2179
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	68.0525	54.4858	pundamilia_nyererei	ENSPNYP00000016095	70.4417	56.3986
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	56.8928	45.9519	neolamprologus_brichardi	ENSNBRP00000026354	71.5268	57.7717
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	69.9125	56.8928	mastacembelus_armatus	ENSMAMP00000002114	62.2201	50.6329
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	67.0678	53.7199	maylandia_zebra	ENSMZEP00005024419	71.2791	57.093
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	57.221	45.6236	maylandia_zebra	ENSMZEP00005024406	73.0447	58.2402
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	22.6477	15.0985	petromyzon_marinus	ENSPMAP00000000535	53.2134	35.4756
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	51.6411	37.6368	lepisosteus_oculatus	ENSLOCP00000020322	62.1053	45.2632
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	44.3107	32.2757	clupea_harengus	ENSCHAP00000004233	58.6107	42.6917
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	17.8337	13.0197	danio_rerio	ENSDARP00000156260	61.0487	44.5693
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	38.6214	28.9934	danio_rerio	ENSDARP00000132549	67.8846	50.9615
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	51.5317	40.4814	astyanax_mexicanus	ENSAMXP00000018959	63.2215	49.6644
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	53.8293	40.7002	carassius_auratus	ENSCARP00000029646	61.0422	46.1538
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	53.8293	41.0284	carassius_auratus	ENSCARP00000124768	66.129	50.4032
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	51.9694	40.2626	ictalurus_punctatus	ENSIPUP00000007965	64.8022	50.2046
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	39.1685	31.0722	electrophorus_electricus	ENSEEEP00000011146	62.9174	49.9121
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	51.86	39.8249	esox_lucius	ENSELUP00000027733	63.369	48.6631
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	50.547	39.7155	oncorhynchus_kisutch	ENSOKIP00005073023	65.812	51.7094
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	51.5317	40.1532	oncorhynchus_kisutch	ENSOKIP00005014089	63.6486	49.5946
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	52.5164	40.0438	oncorhynchus_mykiss	ENSOMYP00000079967	59.4796	45.3532
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	50.6565	39.7155	oncorhynchus_mykiss	ENSOMYP00000012888	65.8606	51.6358
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	50.2188	39.3873	salmo_salar	ENSSSAP00000004993	67.4009	52.8634
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	52.6258	40.4814	salmo_salar	ENSSSAP00000043197	63.5403	48.8771
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	52.954	40.2626	salmo_trutta	ENSSTUP00000096651	63.6842	48.4211
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	49.453	38.4026	salmo_trutta	ENSSTUP00000042373	66.8639	51.9231
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	53.1729	39.7155	gadus_morhua	ENSGMOP00000059657	62.7907	46.8992
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	35.7768	28.2276	gadus_morhua	ENSGMOP00000029576	53.6066	42.2951
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	43.7637	32.7133	gadus_morhua	ENSGMOP00000005717	58.0552	43.3962
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	53.6105	39.9344	gadus_morhua	ENSGMOP00000011498	59.3939	44.2424
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	44.5295	31.0722	erpetoichthys_calabaricus	ENSECRP00000012564	60.1182	41.9498
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	50.4376	35.1203	erpetoichthys_calabaricus	ENSECRP00000012545	52.5656	36.6021
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	52.954	41.7943	pygocentrus_nattereri	ENSPNAP00000000851	60.804	47.9899
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	50	39.1685	hucho_hucho	ENSHHUP00000035570	66.0405	51.7341
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	52.0788	39.9344	hucho_hucho	ENSHHUP00000074019	63.4667	48.6667
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	45.8424	33.5886	sinocyclocheilus_grahami	ENSSGRP00000021155	59.9428	43.9199
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	42.1225	32.0569	sinocyclocheilus_grahami	ENSSGRP00000103367	68.75	52.3214
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	52.1882	40.0438	oncorhynchus_tshawytscha	ENSOTSP00005003882	62.1094	47.6562
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	50.4376	39.6061	oncorhynchus_tshawytscha	ENSOTSP00005017286	67.4963	53.0015
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	50.2188	36.3239	paramormyrops_kingsleyae	ENSPKIP00000041839	49.6753	35.9307
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	53.5011	38.8403	scleropages_formosus	ENSSFOP00015016635	40.2801	29.2422
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	51.4223	39.2779	denticeps_clupeoides	ENSDCDP00000058258	66.0112	50.4213
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	56.0175	43.7637	myripristis_murdjan	ENSMMDP00005005049	70.041	54.7196
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	29.7593	21.5536	myripristis_murdjan	ENSMMDP00005005177	58.1197	42.094
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	31.8381	25.0547	myripristis_murdjan	ENSMMDP00005005208	68.4706	53.8824
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	55.4705	43.7637	myripristis_murdjan	ENSMMDP00005004928	71.308	56.2588
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	56.3457	44.5295	myripristis_murdjan	ENSMMDP00005004959	70.9366	56.0606
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	54.3764	40.919	cyprinus_carpio_carpio	ENSCCRP00000122022	65.7407	49.4709
ENSBSLG00000007228	betta_splendens	ENSBSLP00000013703	53.5011	41.1379	cyprinus_carpio_carpio	ENSCCRP00000117960	64.8541	49.8674

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression