RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBSLG00000002662	Gene ID	114861033	Accession	-
Symbol		Alias	-	Full Name	uncharacterized LOC114861033
Status	Confidence	Length	5461 bases	Strand	Minus strand
Position	8 : 12326447 - 12331907	RNA binding domain	PARP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBSLP00000004918	PARP	PF00644	2e-17	1
ENSBSLP00000004918	PARP	PF00644	2e-17	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBSLT00000005580	918	305aa	ENSBSLP00000004918

Gene Model

Click here to download ENSBSLG00000002662's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBSLG00000002662's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000002662

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40	34.7541	fundulus_heteroclitus	ENSFHEP00000015564	73.0539	63.4731
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40	34.7541	fundulus_heteroclitus	ENSFHEP00000015544	73.9394	64.2424
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	35.7377	30.8197	fundulus_heteroclitus	ENSFHEP00000015548	64.881	55.9524
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	30.8197	26.8852	poecilia_reticulata	ENSPREP00000017068	49.7355	43.3862
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	28.8525	24.5902	poecilia_reticulata	ENSPREP00000020272	51.462	43.8596
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.7049	32.459	poecilia_reticulata	ENSPREP00000020250	72.7848	62.6582
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	34.4262	31.1475	xiphophorus_maculatus	ENSXMAP00000025603	71.4286	64.6258
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.3607	34.7541	xiphophorus_maculatus	ENSXMAP00000019536	74.5223	67.5159
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.0492	30.8197	oryzias_latipes	ENSORLP00000001298	70.625	58.75
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	41.3115	34.7541	oreochromis_niloticus	ENSONIP00000033687	78.2609	65.8385
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	35.082	31.1475	astatotilapia_calliptera	ENSACLP00000028058	77.5362	68.8406
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.6885	34.0984	astatotilapia_calliptera	ENSACLP00000028009	38.3117	33.7662
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.7049	32.1311	sparus_aurata	ENSSAUP00010049867	76.1589	64.9007
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.3279	33.7705	sparus_aurata	ENSSAUP00010049841	63.0769	52.8205
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.3443	34.0984	sparus_aurata	ENSSAUP00010049877	60.3015	52.2613
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40	35.082	sparus_aurata	ENSSAUP00010049843	77.707	68.1529
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.6557	35.7377	sparus_aurata	ENSSAUP00010049838	76.0736	66.8712
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.6721	34.7541	sparus_aurata	ENSSAUP00010049874	70.3488	61.6279
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.377	30.8197	sparus_aurata	ENSSAUP00010049863	67.8571	55.9524
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.0328	31.4754	sparus_aurata	ENSSAUP00010049845	73.4177	60.7595
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	41.6393	34.0984	sparus_aurata	ENSSAUP00010049871	75.5952	61.9048
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.0164	34.4262	haplochromis_burtoni	ENSHBUP00000016959	37.1875	32.8125
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.3443	34.0984	haplochromis_burtoni	ENSHBUP00000032545	75.4717	65.4088
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.6557	35.7377	lates_calcarifer	ENSLCAP00010031334	49.7992	43.7751
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.9836	34.7541	lates_calcarifer	ENSLCAP00010031344	75.3012	63.8554
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.3443	36.3934	cyprinodon_variegatus	ENSCVAP00000012557	72.7273	67.2727
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.0656	31.8033	cyprinodon_variegatus	ENSCVAP00000002610	68.323	60.2484
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	34.4262	30.4918	cyprinodon_variegatus	ENSCVAP00000021592	72.4138	64.1379
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.7049	31.1475	oryzias_melastigma	ENSOMEP00000013841	51.1111	42.2222
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.377	31.1475	oryzias_melastigma	ENSOMEP00000013817	71.6981	59.7484
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.0328	33.1148	kryptolebias_marmoratus	ENSKMAP00000005636	72.956	63.522
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.6557	35.7377	dicentrarchus_labrax	ENSDLAP00005072279	76.5432	67.284
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.3279	35.7377	dicentrarchus_labrax	ENSDLAP00005066328	68.3333	60.5556
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.0328	33.1148	dicentrarchus_labrax	ENSDLAP00005080412	37.1795	32.3718
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.3934	30.8197	dicentrarchus_labrax	ENSDLAP00005081573	69.375	58.75
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.6885	35.4098	dicentrarchus_labrax	ENSDLAP00005077866	63.1016	57.754
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.6721	34.7541	dicentrarchus_labrax	ENSDLAP00005052927	73.3333	64.2424
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.3934	31.8033	dicentrarchus_labrax	ENSDLAP00005081942	56.3452	49.2386
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	42.2951	37.0492	seriola_dumerili	ENSSDUP00000008564	76.3314	66.8639
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.6721	35.7377	labrus_bergylta	ENSLBEP00000013075	69.5402	62.6437
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.9836	36.0656	labrus_bergylta	ENSLBEP00000013097	71.8391	63.2184
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.6557	36.7213	labrus_bergylta	ENSLBEP00000013141	74.6988	67.4699
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	30.4918	26.8852	labrus_bergylta	ENSLBEP00000009303	72.6562	64.0625
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	30.8197	26.5574	labrus_bergylta	ENSLBEP00000009328	39.3305	33.8912
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	41.6393	38.3607	labrus_bergylta	ENSLBEP00000013064	80.8917	74.5223
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	34.4262	30.4918	labrus_bergylta	ENSLBEP00000009314	59.322	52.5424
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.7213	31.8033	labrus_bergylta	ENSLBEP00000009448	76.1905	65.9864
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	42.9508	38.0328	labrus_bergylta	ENSLBEP00000009463	79.3939	70.303
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	41.3115	37.377	labrus_bergylta	ENSLBEP00000013114	81.2903	73.5484
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	34.4262	30.8197	labrus_bergylta	ENSLBEP00000009383	78.9474	70.6767
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	33.7705	28.1967	labrus_bergylta	ENSLBEP00000009422	70.5479	58.9041
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.3443	31.4754	scophthalmus_maximus	ENSSMAP00000024082	19.802	15.8416
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.6885	33.4426	poecilia_latipinna	ENSPLAP00000011241	72.8395	62.963
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.3934	33.7705	poecilia_latipinna	ENSPLAP00000030075	68.9441	63.9752
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.9836	35.7377	amphilophus_citrinellus	ENSACIP00000023749	77.6398	67.7019
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.377	32.7869	poecilia_formosa	ENSPFOP00000020560	78.6207	68.9655
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.6721	32.7869	acanthochromis_polyacanthus	ENSAPOP00000008085	75.625	62.5
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.0164	35.7377	gasterosteus_aculeatus	ENSGACP00000019706	78.2895	71.7105
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.3443	32.7869	amphiprion_ocellaris	ENSAOCP00000016996	75.9494	63.2911
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.7213	31.1475	amphiprion_ocellaris	ENSAOCP00000016985	75.6757	64.1892
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.7213	31.1475	amphiprion_ocellaris	ENSAOCP00000007182	75.6757	64.1892
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.9836	35.4098	hippocampus_comes	ENSHCOP00000020553	77.1605	66.6667
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	43.2787	38.0328	seriola_lalandi_dorsalis	ENSSLDP00000015595	77.193	67.8363
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.3443	32.7869	stegastes_partitus	ENSSPAP00000007011	68.5714	57.1429
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.0328	31.4754	stegastes_partitus	ENSSPAP00000007019	77.8523	64.4295
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	39.0164	35.7377	anabas_testudineus	ENSATEP00000028022	82.6389	75.6944
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.7049	33.1148	larimichthys_crocea	ENSLCRP00005006947	73.7179	64.7436
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	34.7541	28.5246	oryzias_sinensis	ENSOSIP00000017954	73.1034	60
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	35.7377	31.4754	oryzias_javanicus	ENSOJAP00000003890	68.5535	60.3774
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.7049	31.1475	oryzias_javanicus	ENSOJAP00000003912	47.3251	39.0947
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.7213	30.8197	amphiprion_percula	ENSAPEP00000007936	75.6757	63.5135
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.3607	32.459	amphiprion_percula	ENSAPEP00000007884	68.4211	57.8947
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.6885	31.4754	amphiprion_percula	ENSAPEP00000007913	76.6234	62.3377
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.0492	31.1475	nothobranchius_furzeri	ENSNFUP00015027826	75.3333	63.3333
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.6557	34.7541	neolamprologus_brichardi	ENSNBRP00000011644	76.5432	65.4321
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.6885	33.7705	neolamprologus_brichardi	ENSNBRP00000011656	71.5152	62.4242
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	77.0492	67.2131	mastacembelus_armatus	ENSMAMP00000044510	30.1669	26.3158
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.3279	35.4098	maylandia_zebra	ENSMZEP00005003012	78.8462	69.2308
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.6557	35.7377	maylandia_zebra	ENSMZEP00005003021	77.0186	67.7019
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.6885	35.082	maylandia_zebra	ENSMZEP00005002994	34.9112	31.6568
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	26.8852	20.9836	oncorhynchus_mykiss	ENSOMYP00000108381	63.0769	49.2308
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.7213	32.7869	salmo_salar	ENSSSAP00000022507	71.7949	64.1026
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.377	32.1311	salmo_salar	ENSSSAP00000121230	71.6981	61.6352
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	24.2623	20.3279	gadus_morhua	ENSGMOP00000025974	53.2374	44.6043
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	37.0492	32.1311	gadus_morhua	ENSGMOP00000061217	25.4505	22.0721
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	33.4426	30.1639	gadus_morhua	ENSGMOP00000021415	52.3077	47.1795
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	36.3934	31.8033	gadus_morhua	ENSGMOP00000022099	48.0519	41.9913
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	34.7541	30.4918	gadus_morhua	ENSGMOP00000021402	57.6087	50.5435
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	38.0328	32.459	gadus_morhua	ENSGMOP00000051724	49.1525	41.9492
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	27.2131	22.2951	hucho_hucho	ENSHHUP00000006652	45.1087	36.9565
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	31.1475	24.2623	leptobrachium_leishanense	ENSLLEP00000020190	14.5482	11.3323
ENSBSLG00000002662	betta_splendens	ENSBSLP00000004918	40.6557	36.3934	myripristis_murdjan	ENSMMDP00005045282	76.5432	68.5185

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression