| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSBSLG00000000909 | Gene ID |
114855265 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
chromodomain helicase DNA binding protein 5 |
| Status |
Confidence |
Length |
22345 bases |
Strand |
Plus strand |
| Position |
5 : 17551946 - 17574290 |
RNA binding domain |
ResIII |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSBSLP00000001746 |
ResIII |
PF04851 |
2.5e-08 |
1 |
| ENSBSLP00000001751 |
ResIII |
PF04851 |
3e-08 |
1 |
| ENSBSLP00000001749 |
ResIII |
PF04851 |
3.3e-08 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSBSLT00000002090 |
7003 |
2000aa |
ENSBSLP00000001746 |
| - |
ENSBSLT00000002094 |
5550 |
1849aa |
ENSBSLP00000001749 |
| - |
ENSBSLT00000002096 |
5277 |
1758aa |
ENSBSLP00000001751 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000041650 | 76.4557 | 65.7215 | betta_splendens | ENSBSLP00000001746 | 75.5 | 64.9 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000042182 | 78.2922 | 67.3354 | betta_splendens | ENSBSLP00000001746 | 76.1 | 65.45 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000012747 | 30.4245 | 17.0991 | betta_splendens | ENSBSLP00000001746 | 12.9 | 7.25 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000050615 | 29.6364 | 16.5455 | betta_splendens | ENSBSLP00000001746 | 16.3 | 9.1 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000038496 | 29.379 | 15.9236 | betta_splendens | ENSBSLP00000001746 | 18.45 | 10 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000012193 | 25.4503 | 16.4448 | betta_splendens | ENSBSLP00000001746 | 32.5 | 21 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000025320 | 25.6131 | 16.0763 | betta_splendens | ENSBSLP00000001746 | 32.9 | 20.65 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000031654 | 33.2906 | 19.628 | betta_splendens | ENSBSLP00000001746 | 25.95 | 15.3 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000040091 | 30.2158 | 14.3885 | betta_splendens | ENSBSLP00000001746 | 4.2 | 2 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000035710 | 44.6759 | 29.1667 | betta_splendens | ENSBSLP00000001746 | 19.3 | 12.6 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000045372 | 29.0385 | 18.0128 | betta_splendens | ENSBSLP00000001746 | 22.65 | 14.05 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000007008 | 44.4886 | 28.2026 | betta_splendens | ENSBSLP00000001746 | 22.4 | 14.2 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000057011 | 16.9686 | 9.42029 | betta_splendens | ENSBSLP00000001746 | 14.05 | 7.8 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000029356 | 19.1398 | 12.3042 | betta_splendens | ENSBSLP00000001746 | 33.6 | 21.6 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000014192 | 32.8 | 20.1231 | betta_splendens | ENSBSLP00000001746 | 26.65 | 16.35 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000013984 | 31.8182 | 18.8397 | betta_splendens | ENSBSLP00000001746 | 26.6 | 15.75 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000044455 | 21.177 | 13.2858 | betta_splendens | ENSBSLP00000001746 | 23.75 | 14.9 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000014053 | 34.6154 | 21.6698 | betta_splendens | ENSBSLP00000001746 | 18.45 | 11.55 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000046897 | 27.4544 | 14.9435 | betta_splendens | ENSBSLP00000001746 | 15.8 | 8.6 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000027484 | 19.3151 | 10.4452 | betta_splendens | ENSBSLP00000001746 | 28.2 | 15.25 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000005786 | 29.0621 | 16.4465 | betta_splendens | ENSBSLP00000001746 | 22 | 12.45 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000003506 | 28.4488 | 15.7096 | betta_splendens | ENSBSLP00000001746 | 21.55 | 11.9 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000040639 | 25.4953 | 13.9729 | betta_splendens | ENSBSLP00000001746 | 24.45 | 13.4 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000053892 | 31.6936 | 17.8496 | betta_splendens | ENSBSLP00000001746 | 22.55 | 12.7 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000006100 | 36.9334 | 22.7756 | betta_splendens | ENSBSLP00000001746 | 33 | 20.35 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000056366 | 36.3441 | 22.2581 | betta_splendens | ENSBSLP00000001746 | 16.9 | 10.35 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000017367 | 23.6746 | 15.0383 | betta_splendens | ENSBSLP00000001746 | 35.5 | 22.55 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000013705 | 31.9599 | 18.3742 | betta_splendens | ENSBSLP00000001746 | 14.35 | 8.25 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000025098 | 38.6792 | 23.0458 | betta_splendens | ENSBSLP00000001746 | 14.35 | 8.55 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000004095 | 72.7273 | 63.024 | betta_splendens | ENSBSLP00000001746 | 77.2 | 66.9 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000030575 | 26.1256 | 13.8626 | betta_splendens | ENSBSLP00000001746 | 22.05 | 11.7 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000003085 | 31.8841 | 18.8406 | betta_splendens | ENSBSLP00000001746 | 16.5 | 9.75 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000003366 | 45.648 | 30.1741 | betta_splendens | ENSBSLP00000001746 | 23.6 | 15.6 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000042942 | 36.0331 | 22.5344 | betta_splendens | ENSBSLP00000001746 | 32.7 | 20.45 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000005934 | 21.9709 | 12.4394 | betta_splendens | ENSBSLP00000001746 | 20.4 | 11.55 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 82.9 | 81.4 | fundulus_heteroclitus | ENSFHEP00000022697 | 95.1234 | 93.4022 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 81.95 | 79.5 | poecilia_reticulata | ENSPREP00000021169 | 90.8537 | 88.1375 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 95.85 | 93.25 | xiphophorus_maculatus | ENSXMAP00000035619 | 95.8021 | 93.2034 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 83 | 80.35 | oryzias_latipes | ENSORLP00000021515 | 93.1538 | 90.1796 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 86.9 | 84.25 | cyclopterus_lumpus | ENSCLMP00005039633 | 94.354 | 91.4767 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 96.8 | 94.9 | sparus_aurata | ENSSAUP00010043507 | 94.7626 | 92.9026 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 85.95 | 84 | cyprinodon_variegatus | ENSCVAP00000028939 | 93.4239 | 91.3043 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 85.1 | 82.35 | oryzias_melastigma | ENSOMEP00000013432 | 91.7026 | 88.7392 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 87.45 | 83 | takifugu_rubripes | ENSTRUP00000079268 | 92.3442 | 87.6452 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 83.55 | 81.75 | kryptolebias_marmoratus | ENSKMAP00000024109 | 93.9292 | 91.9056 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 97.15 | 94.9 | dicentrarchus_labrax | ENSDLAP00005054293 | 95.9033 | 93.6821 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 72.8 | 71.15 | labrus_bergylta | ENSLBEP00000035617 | 97.1314 | 94.93 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 85.3 | 82.6 | scophthalmus_maximus | ENSSMAP00000029345 | 92.0669 | 89.1527 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 86.3 | 83.65 | poecilia_formosa | ENSPFOP00000017138 | 95.7825 | 92.8413 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 95.15 | 91.2 | cottoperca_gobio | ENSCGOP00000047496 | 94.6766 | 90.7463 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 87.2 | 85.65 | acanthochromis_polyacanthus | ENSAPOP00000032487 | 93.8644 | 92.1959 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 72.1 | 68.9 | hippocampus_comes | ENSHCOP00000024712 | 90.6918 | 86.6667 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 83.05 | 81.2 | sander_lucioperca | ENSSLUP00000051067 | 92.9491 | 90.8786 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 85.9 | 84.55 | seriola_lalandi_dorsalis | ENSSLDP00000025663 | 94.2403 | 92.7592 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 88.5 | 87.6 | anabas_testudineus | ENSATEP00000046972 | 95.1613 | 94.1936 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 88.65 | 86.9 | larimichthys_crocea | ENSLCRP00005050251 | 94.6105 | 92.7428 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 77.75 | 75.25 | oryzias_sinensis | ENSOSIP00000035811 | 90.302 | 87.3984 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 79.45 | 77.3 | oryzias_javanicus | ENSOJAP00000008472 | 91.585 | 89.1066 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 86.4 | 83.9 | cynoglossus_semilaevis | ENSCSEP00000028351 | 95.3116 | 92.5538 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 86.25 | 85.1 | amphiprion_percula | ENSAPEP00000028720 | 95.9399 | 94.6607 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 95.4 | 92.5 | nothobranchius_furzeri | ENSNFUP00015049901 | 95.3523 | 92.4538 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 84.65 | 83.15 | neolamprologus_brichardi | ENSNBRP00000014813 | 95.4879 | 93.7958 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 88.05 | 85.85 | mastacembelus_armatus | ENSMAMP00000003219 | 94.9326 | 92.5606 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 15.05 | 10.55 | ciona_intestinalis | ENSCINP00000035400 | 56.5789 | 39.6617 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 70.65 | 66.55 | gadus_morhua | ENSGMOP00000022298 | 85.1718 | 80.2291 |
| ENSBSLG00000000909 | betta_splendens | ENSBSLP00000001746 | 62.55 | 49.65 | ciona_savignyi | ENSCSAVP00000007438 | 69.5 | 55.1667 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
