RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSBOBG00000003361	Gene ID		Accession	-
Symbol		Alias	-	Full Name	activation induced cytidine deaminase
Status	Confidence	Length	2220 bases	Strand	Minus strand
Position	ML980594.1 : 1965038 - 1967257	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBOBP00000004945	APOBEC_N	PF08210	8.5e-62	1
ENSBOBP00000004945	APOBEC_C	PF05240	1.7e-28	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBOBT00000005076	588	195aa	ENSBOBP00000004945

Gene Model

Click here to download ENSBOBG00000003361's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBOBG00000003361's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBOBG00000003361

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBOBG00000003361

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression