RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBMUG00000026859	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	426 bases	Strand	Plus strand
Position	JH883851.1 : 9618 - 10043	RNA binding domain	Ribosomal_S10
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBMUP00000036159	Ribosomal_S10	PF00338	3.7e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBMUT00000041576	426	141aa	ENSBMUP00000036159

Gene Model

Click here to download ENSBMUG00000026859's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBMUG00000026859's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMUG00000026859	bos_mutus	ENSBMUP00000009247	92.1875	89.0625	bos_mutus	ENSBMUP00000036159	41.844	40.4255
ENSBMUG00000026859	bos_mutus	ENSBMUP00000015297	48.7395	47.0588	bos_mutus	ENSBMUP00000036159	41.1348	39.7163
ENSBMUG00000026859	bos_mutus	ENSBMUP00000017427	54.6296	52.7778	bos_mutus	ENSBMUP00000036159	41.844	40.4255

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	dasypus_novemcinctus	ENSDNOP00000023959	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	40.4255	38.2979	mandrillus_leucophaeus	ENSMLEP00000005484	89.0625	84.375
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	canis_lupus_familiaris	ENSCAFP00845037054	49.1667	47.5
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	40.4255	36.8794	felis_catus	ENSFCAP00000028859	48.3051	44.0678
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	39.7163	36.1702	panthera_leo	ENSPLOP00000012020	47.4576	43.2203
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	40.4255	36.8794	panthera_pardus	ENSPPRP00000012134	48.3051	44.0678
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	39.0071	delphinapterus_leucas	ENSDLEP00000010136	92.1875	85.9375
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	39.0071	36.8794	physeter_catodon	ENSPCTP00005005219	87.3016	82.5397
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	39.7163	36.8794	balaenoptera_musculus	ENSBMSP00010016883	88.8889	82.5397
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	45.3901	43.2624	capra_hircus	ENSCHIP00000022074	51.2	48.8
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	65.9574	63.1206	bos_taurus	ENSBTAP00000070009	75.6098	72.3577
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	46.0993	44.6809	ovis_aries_rambouillet	ENSOARP00020034594	92.8571	90
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	42.5532	41.1348	rattus_norvegicus	ENSRNOP00000066750	53.5714	51.7857
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	rattus_norvegicus	ENSRNOP00000064524	47.9675	46.3415
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	40.4255	37.5887	mus_spicilegus	ENSMSIP00000029310	83.8235	77.9412
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	21.2766	21.2766	mus_spicilegus	ENSMSIP00000021165	34.8837	34.8837
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	40.4255	39.0071	vombatus_ursinus	ENSVURP00010032222	47.8992	46.2185
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.1348	39.0071	aotus_nancymaae	ENSANAP00000000442	90.625	85.9375
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	39.0071	monodon_monoceros	ENSMMNP00015023856	92.1875	85.9375
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	34.7518	32.6241	ictidomys_tridecemlineatus	ENSSTOP00000026968	43.75	41.0714
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	99.2908	99.2908	bison_bison_bison	ENSBBBP00000013825	99.2908	99.2908
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	39.0071	phocoena_sinus	ENSPSNP00000014767	92.1875	85.9375
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	27.6596	26.9504	catagonus_wagneri	ENSCWAP00000013626	39.7959	38.7755
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.1348	40.4255	sciurus_vulgaris	ENSSVLP00005025209	49.1525	48.3051
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	42.5532	41.1348	cebus_imitator	ENSCCAP00000002639	93.75	90.625
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	cervus_hanglu_yarkandensis	ENSCHYP00000026175	50.8621	49.1379
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	peromyscus_maniculatus_bairdii	ENSPEMP00000032343	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	37.5887	34.0426	neovison_vison	ENSNVIP00000010588	50	45.283
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	34.7518	31.9149	nannospalax_galili	ENSNGAP00000020267	47.5728	43.6893
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	53.9007	49.6454	moschus_moschiferus	ENSMMSP00000008884	71.6981	66.0377
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	56.7376	50.3546	propithecus_coquereli	ENSPCOP00000002944	72.7273	64.5455
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	39.7163	34.7518	caenorhabditis_elegans	Y105E8A.16.1	47.8632	41.8803
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.1348	36.8794	drosophila_melanogaster	FBpp0083371	48.3333	43.3333
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	39.7163	36.8794	ciona_intestinalis	ENSCINP00000001547	43.75	40.625
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.1348	39.7163	petromyzon_marinus	ENSPMAP00000005542	48.3333	46.6667
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	40.4255	39.0071	eptatretus_burgeri	ENSEBUP00000018480	50.8929	49.1071
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	callorhinchus_milii	ENSCMIP00000038698	39.5973	38.255
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	lepisosteus_oculatus	ENSLOCP00000006538	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	carassius_auratus	ENSCARP00000113716	53.6364	51.8182
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	carassius_auratus	ENSCARP00000019372	47.2	45.6
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	astyanax_mexicanus	ENSAMXP00000042426	50.4273	48.7179
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	ictalurus_punctatus	ENSIPUP00000024306	47.2	45.6
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	electrophorus_electricus	ENSEEEP00000003252	40.6897	39.3103
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	esox_lucius	ENSELUP00000062835	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	oncorhynchus_kisutch	ENSOKIP00005013202	36.1963	34.9693
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	oncorhynchus_mykiss	ENSOMYP00000014693	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	salmo_trutta	ENSSTUP00000052373	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	salmo_trutta	ENSSTUP00000053502	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	fundulus_heteroclitus	ENSFHEP00000032677	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	gadus_morhua	ENSGMOP00000038743	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	poecilia_reticulata	ENSPREP00000013351	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	xiphophorus_maculatus	ENSXMAP00000032285	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	cyclopterus_lumpus	ENSCLMP00005031772	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	haplochromis_burtoni	ENSHBUP00000008213	45.0382	43.5115
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	oreochromis_niloticus	ENSONIP00000061295	37.5796	36.3057
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	sparus_aurata	ENSSAUP00010005457	48.7603	47.1074
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	astatotilapia_calliptera	ENSACLP00000019488	45.0382	43.5115
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	xenopus_tropicalis	ENSXETP00000106337	45.3846	43.8462
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	lates_calcarifer	ENSLCAP00010056602	49.1667	47.5
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	crocodylus_porosus	ENSCPRP00005023530	49.1667	47.5
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	4.25532	4.25532	sphenodon_punctatus	ENSSPUP00000016622	9.83607	9.83607
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	notechis_scutatus	ENSNSUP00000022393	44.0299	42.5373
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	laticauda_laticaudata	ENSLLTP00000006691	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	anas_platyrhynchos_platyrhynchos	ENSAPLP00000006691	92.1875	89.0625
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	pseudonaja_textilis	ENSPTXP00000005564	38.8158	37.5
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	gallus_gallus	ENSGALP00010005591	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	serinus_canaria	ENSSCAP00000001771	92.1875	89.0625
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.1348	39.7163	meleagris_gallopavo	ENSMGAP00000011466	49.1525	47.4576
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	parus_major	ENSPMJP00000021169	47.9675	46.3415
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	dicentrarchus_labrax	ENSDLAP00005044303	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	erpetoichthys_calabaricus	ENSECRP00000007578	49.1667	47.5
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	39.7163	38.2979	takifugu_rubripes	ENSTRUP00000076506	44.0945	42.5197
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	naja_naja	ENSNNAP00000026941	39.3333	38
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	kryptolebias_marmoratus	ENSKMAP00000005348	32.2404	31.1475
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	neolamprologus_brichardi	ENSNBRP00000010965	53.6364	51.8182
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	seriola_dumerili	ENSSDUP00000007734	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	pygocentrus_nattereri	ENSPNAP00000032800	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	poecilia_formosa	ENSPFOP00000012053	31.8919	30.8108
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	geospiza_fortis	ENSGFOP00000004431	50	48.3051
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	poecilia_latipinna	ENSPLAP00000031006	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	scophthalmus_maximus	ENSSMAP00000047564	30.2564	29.2308
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	cottoperca_gobio	ENSCGOP00000005072	32.5967	31.4917
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	labrus_bergylta	ENSLBEP00000037926	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	ficedula_albicollis	ENSFALP00000010727	50	48.3051
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	taeniopygia_guttata	ENSTGUP00000011438	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	anabas_testudineus	ENSATEP00000052232	39.8649	38.5135
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	hucho_hucho	ENSHHUP00000006333	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	salvator_merianae	ENSSMRP00000013256	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	larimichthys_crocea	ENSLCRP00005060267	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	tetraodon_nigroviridis	ENSTNIP00000001041	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	aquila_chrysaetos_chrysaetos	ENSACCP00020006093	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	struthio_camelus_australis	ENSSCUP00000010243	41.5493	40.1408
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	34.7518	26.9504	saccharomyces_cerevisiae	YHL015W	40.4959	31.405
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	scleropages_formosus	ENSSFOP00015072098	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	amphilophus_citrinellus	ENSACIP00000018630	92.1875	89.0625
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	acanthochromis_polyacanthus	ENSAPOP00000000710	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	cynoglossus_semilaevis	ENSCSEP00000020546	92.1875	89.0625
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	gasterosteus_aculeatus	ENSGACP00000002531	47.2	45.6
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	34.7518	29.7872	pundamilia_nyererei	ENSPNYP00000006682	62.0253	53.1646
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	nothobranchius_furzeri	ENSNFUP00015034434	50.4273	48.7179
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	strigops_habroptila	ENSSHBP00005004394	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	sander_lucioperca	ENSSLUP00000020060	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	leptobrachium_leishanense	ENSLLEP00000011100	47.5806	45.9677
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	denticeps_clupeoides	ENSDCDP00000011142	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	oryzias_sinensis	ENSOSIP00000010720	35.119	33.9286
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	cyprinus_carpio_carpio	ENSCCRP00000150026	37.3418	36.076
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	cyprinus_carpio_carpio	ENSCCRP00000174603	49.1667	47.5
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	betta_splendens	ENSBSLP00000035232	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	maylandia_zebra	ENSMZEP00005033469	51.7544	50
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	maylandia_zebra	ENSMZEP00005005123	51.7544	50
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	maylandia_zebra	ENSMZEP00005029716	53.6364	51.8182
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	amphiprion_ocellaris	ENSAOCP00000005195	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	coturnix_japonica	ENSCJPP00005012217	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	36.8794	32.6241	stegastes_partitus	ENSSPAP00000009980	83.871	74.1936
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.1348	39.7163	paramormyrops_kingsleyae	ENSPKIP00000029138	42.963	41.4815
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	amphiprion_percula	ENSAPEP00000010962	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	oncorhynchus_tshawytscha	ENSOTSP00005005238	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	oncorhynchus_tshawytscha	ENSOTSP00005056031	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	oncorhynchus_tshawytscha	ENSOTSP00005048534	49.5798	47.8992
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	anser_brachyrhynchus	ENSABRP00000006025	92.1875	89.0625
ENSBMUG00000026859	bos_mutus	ENSBMUP00000036159	41.844	40.4255	mastacembelus_armatus	ENSMAMP00000024426	49.5798	47.8992

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression