RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBMUG00000007202	Gene ID	102278161	Accession	-
Symbol		Alias	-	Full Name	40S ribosomal protein S20-like
Status	Confidence	Length	195 bases	Strand	Minus strand
Position	JH881205.1 : 1902998 - 1903192	RNA binding domain	Ribosomal_S10
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBMUP00000009247	Ribosomal_S10	PF00338	3.1e-17	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBMUT00000010772	195	64aa	ENSBMUP00000009247

Gene Model

Click here to download ENSBMUG00000007202's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBMUG00000007202's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMUG00000007202	bos_mutus	ENSBMUP00000036159	41.844	40.4255	bos_mutus	ENSBMUP00000009247	92.1875	89.0625
ENSBMUG00000007202	bos_mutus	ENSBMUP00000015297	52.9412	52.9412	bos_mutus	ENSBMUP00000009247	98.4375	98.4375
ENSBMUG00000007202	bos_mutus	ENSBMUP00000017427	59.2593	59.2593	bos_mutus	ENSBMUP00000009247	100	100

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	87.5	81.25	dasypus_novemcinctus	ENSDNOP00000034875	36.3636	33.7662
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	90.625	89.0625	callithrix_jacchus	ENSCJAP00000043212	48.7395	47.8992
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	98.4375	96.875	pan_paniscus	ENSPPAP00000005108	98.4375	96.875
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	canis_lupus_familiaris	ENSCAFP00845037054	53.3333	53.3333
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	98.4375	96.875	pan_troglodytes	ENSPTRP00000078281	98.4375	96.875
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	92.1875	92.1875	delphinapterus_leucas	ENSDLEP00000030599	92.1875	92.1875
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	92.1875	90.625	physeter_catodon	ENSPCTP00005020737	49.5798	48.7395
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	bos_taurus	ENSBTAP00000057238	100	100
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	81.25	79.6875	dipodomys_ordii	ENSDORP00000018390	46.4286	45.5357
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	rattus_norvegicus	ENSRNOP00000066050	52.8926	52.8926
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	95.3125	95.3125	heterocephalus_glaber_female	ENSHGLP00000042688	95.3125	95.3125
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	92.1875	90.625	heterocephalus_glaber_female	ENSHGLP00000007217	92.1875	90.625
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	vicugna_pacos	ENSVPAP00000010405	76.1905	76.1905
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	85.9375	79.6875	otolemur_garnettii	ENSOGAP00000020401	52.8846	49.0385
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	92.1875	92.1875	monodon_monoceros	ENSMMNP00015003408	47.9675	47.9675
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	84.375	82.8125	ictidomys_tridecemlineatus	ENSSTOP00000026968	48.2143	47.3214
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	95.3125	95.3125	phocoena_sinus	ENSPSNP00000028187	50.8333	50.8333
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	82.8125	82.8125	jaculus_jaculus	ENSJJAP00000023461	92.9825	92.9825
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	89.0625	87.5	rhinopithecus_bieti	ENSRBIP00000014017	56.4356	55.4455
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	81.25	79.6875	cebus_imitator	ENSCCAP00000002871	49.0566	48.1132
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	96.875	95.3125	cebus_imitator	ENSCCAP00000003726	96.875	95.3125
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	cervus_hanglu_yarkandensis	ENSCHYP00000031348	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	cervus_hanglu_yarkandensis	ENSCHYP00000005723	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	95.3125	82.8125	caenorhabditis_elegans	Y105E8A.16.1	52.1368	45.2991
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	98.4375	92.1875	drosophila_melanogaster	FBpp0083371	52.5	49.1667
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	95.3125	92.1875	ciona_intestinalis	ENSCINP00000001547	47.6562	46.0938
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	98.4375	98.4375	petromyzon_marinus	ENSPMAP00000005542	52.5	52.5
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	96.875	96.875	eptatretus_burgeri	ENSEBUP00000018480	55.3571	55.3571
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	callorhinchus_milii	ENSCMIP00000038698	42.953	42.953
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	lepisosteus_oculatus	ENSLOCP00000006538	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	carassius_auratus	ENSCARP00000113716	58.1818	58.1818
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	carassius_auratus	ENSCARP00000019372	51.2	51.2
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	astyanax_mexicanus	ENSAMXP00000042426	54.7009	54.7009
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	ictalurus_punctatus	ENSIPUP00000024306	51.2	51.2
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	electrophorus_electricus	ENSEEEP00000003252	44.1379	44.1379
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	esox_lucius	ENSELUP00000062835	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	oncorhynchus_kisutch	ENSOKIP00005013202	39.2638	39.2638
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	oncorhynchus_mykiss	ENSOMYP00000014693	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	salmo_trutta	ENSSTUP00000052373	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	salmo_trutta	ENSSTUP00000053502	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	fundulus_heteroclitus	ENSFHEP00000032677	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	gadus_morhua	ENSGMOP00000038743	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	poecilia_reticulata	ENSPREP00000013351	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	xiphophorus_maculatus	ENSXMAP00000032285	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	cyclopterus_lumpus	ENSCLMP00005031772	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	haplochromis_burtoni	ENSHBUP00000008213	48.855	48.855
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	oreochromis_niloticus	ENSONIP00000061295	40.7643	40.7643
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	sparus_aurata	ENSSAUP00010005457	52.8926	52.8926
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	astatotilapia_calliptera	ENSACLP00000019488	48.855	48.855
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	xenopus_tropicalis	ENSXETP00000106337	49.2308	49.2308
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	lates_calcarifer	ENSLCAP00010056602	53.3333	53.3333
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	crocodylus_porosus	ENSCPRP00005023530	53.3333	53.3333
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	9.375	9.375	sphenodon_punctatus	ENSSPUP00000016622	9.83607	9.83607
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	notechis_scutatus	ENSNSUP00000022393	47.7612	47.7612
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	laticauda_laticaudata	ENSLLTP00000006691	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	anas_platyrhynchos_platyrhynchos	ENSAPLP00000006691	100	100
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	pseudonaja_textilis	ENSPTXP00000005564	42.1053	42.1053
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	gallus_gallus	ENSGALP00010005591	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	serinus_canaria	ENSSCAP00000001771	100	100
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	98.4375	98.4375	meleagris_gallopavo	ENSMGAP00000011466	53.3898	53.3898
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	parus_major	ENSPMJP00000021169	52.0325	52.0325
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	dicentrarchus_labrax	ENSDLAP00005044303	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	erpetoichthys_calabaricus	ENSECRP00000007578	53.3333	53.3333
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	95.3125	95.3125	takifugu_rubripes	ENSTRUP00000076506	48.0315	48.0315
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	naja_naja	ENSNNAP00000026941	42.6667	42.6667
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	kryptolebias_marmoratus	ENSKMAP00000005348	34.9727	34.9727
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	neolamprologus_brichardi	ENSNBRP00000010965	58.1818	58.1818
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	seriola_dumerili	ENSSDUP00000007734	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	pygocentrus_nattereri	ENSPNAP00000032800	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	poecilia_formosa	ENSPFOP00000012053	34.5946	34.5946
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	geospiza_fortis	ENSGFOP00000004431	54.2373	54.2373
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	poecilia_latipinna	ENSPLAP00000031006	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	scophthalmus_maximus	ENSSMAP00000047564	32.8205	32.8205
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	cottoperca_gobio	ENSCGOP00000005072	35.3591	35.3591
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	labrus_bergylta	ENSLBEP00000037926	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	ficedula_albicollis	ENSFALP00000010727	54.2373	54.2373
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	taeniopygia_guttata	ENSTGUP00000011438	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	anabas_testudineus	ENSATEP00000052232	43.2432	43.2432
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	hucho_hucho	ENSHHUP00000006333	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	salvator_merianae	ENSSMRP00000013256	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	larimichthys_crocea	ENSLCRP00005060267	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	tetraodon_nigroviridis	ENSTNIP00000001041	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	aquila_chrysaetos_chrysaetos	ENSACCP00020006093	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	struthio_camelus_australis	ENSSCUP00000010243	45.0704	45.0704
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	84.375	65.625	saccharomyces_cerevisiae	YHL015W	44.6281	34.7107
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	scleropages_formosus	ENSSFOP00015072098	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	amphilophus_citrinellus	ENSACIP00000018630	100	100
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	acanthochromis_polyacanthus	ENSAPOP00000000710	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	cynoglossus_semilaevis	ENSCSEP00000020546	100	100
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	gasterosteus_aculeatus	ENSGACP00000002531	51.2	51.2
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	76.5625	68.75	pundamilia_nyererei	ENSPNYP00000006682	62.0253	55.6962
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	nothobranchius_furzeri	ENSNFUP00015034434	54.7009	54.7009
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	strigops_habroptila	ENSSHBP00005004394	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	sander_lucioperca	ENSSLUP00000020060	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	leptobrachium_leishanense	ENSLLEP00000011100	51.6129	51.6129
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	denticeps_clupeoides	ENSDCDP00000011142	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	oryzias_sinensis	ENSOSIP00000010720	38.0952	38.0952
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	cyprinus_carpio_carpio	ENSCCRP00000150026	40.5063	40.5063
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	cyprinus_carpio_carpio	ENSCCRP00000174603	53.3333	53.3333
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	betta_splendens	ENSBSLP00000035232	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	maylandia_zebra	ENSMZEP00005033469	56.1404	56.1404
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	maylandia_zebra	ENSMZEP00005005123	56.1404	56.1404
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	maylandia_zebra	ENSMZEP00005029716	58.1818	58.1818
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	amphiprion_ocellaris	ENSAOCP00000005195	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	coturnix_japonica	ENSCJPP00005012217	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	89.0625	82.8125	stegastes_partitus	ENSSPAP00000009980	91.9355	85.4839
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	98.4375	98.4375	paramormyrops_kingsleyae	ENSPKIP00000029138	46.6667	46.6667
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	amphiprion_percula	ENSAPEP00000010962	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	oncorhynchus_tshawytscha	ENSOTSP00005005238	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	oncorhynchus_tshawytscha	ENSOTSP00005056031	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	oncorhynchus_tshawytscha	ENSOTSP00005048534	53.7815	53.7815
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	anser_brachyrhynchus	ENSABRP00000006025	100	100
ENSBMUG00000007202	bos_mutus	ENSBMUP00000009247	100	100	mastacembelus_armatus	ENSMAMP00000024426	53.7815	53.7815

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression