RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	ENSBMUG00000004892	Gene ID	102264494	Accession	-
Symbol	PARP16	Alias	-	Full Name	poly(ADP-ribose) polymerase family member 16
Status	Confidence	Length	25574 bases	Strand	Minus strand
Position	JH881599.1 : 1231892 - 1257465	RNA binding domain	PARP
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSBMUP00000006227	PARP	PF00644	2.7e-34	1
ENSBMUP00000006231	PARP	PF00644	2.6e-34	1
ENSBMUP00000006260	PARP	PF00644	4.1e-16	1

Showing 1 to 3 of 3 entries

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
PARP16-201	ENSBMUT00000007232	2514	322aa	ENSBMUP00000006227
PARP16-202	ENSBMUT00000007236	1905	317aa	ENSBMUP00000006231
PARP16-203	ENSBMUT00000007270	624	207aa	ENSBMUP00000006260

Showing 1 to 3 of 3 entries

Gene Model

Click here to download ENSBMUG00000004892's gene model file

Protein-Protein Interaction (PPI)

Click here to download ENSBMUG00000004892's PPI file

Paralogs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMUG00000004892	bos_mutus	ENSBMUP00000007229	14.7816	9.18253	bos_mutus	ENSBMUP00000006227	40.9938	25.4658

Showing 1 to 1 of 1 entries

Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	79.5031	66.7702	ornithorhynchus_anatinus	ENSOANP00000012999	79.5031	66.7702
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	87.2671	78.882	sarcophilus_harrisii	ENSSHAP00000041288	86.4615	78.1538
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	87.2671	78.882	notamacropus_eugenii	ENSMEUP00000001718	86.1963	77.9141
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	94.0994	91.6149	dasypus_novemcinctus	ENSDNOP00000003180	75.9398	73.9348
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	77.9503	73.913	echinops_telfairi	ENSETEP00000010491	94.717	89.8113
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	95.3416	92.5466	callithrix_jacchus	ENSCJAP00000012837	95.0464	92.2601
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	95.3416	92.5466	cercocebus_atys	ENSCATP00000011478	95.3416	92.5466
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	95.3416	92.236	macaca_fascicularis	ENSMFAP00000007086	95.3416	92.236
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	95.6522	92.8571	macaca_mulatta	ENSMMUP00000007587	95.6522	92.8571
ENSBMUG00000004892	bos_mutus	ENSBMUP00000006227	95.3416	92.5466	macaca_nemestrina	ENSMNEP00000007840	95.3416	92.5466

Showing 1 to 10 of 209 entries

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Contents

Description
RBDs
Transcripts
Gene Model
PPI
Paralogs
Orthologs