RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBMSG00010010140	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2253 bases	Strand	Plus strand
Position	10 : 95272980 - 95275232	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBMSP00010013875	APOBEC_N	PF08210	4.2e-45	1
ENSBMSP00010013875	APOBEC_C	PF05240	3.4e-29	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBMST00010015393	540	180aa	ENSBMSP00010013875

Gene Model

Click here to download ENSBMSG00010010140's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBMSG00010010140's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010026010	51.7588	34.6734	balaenoptera_musculus	ENSBMSP00010013875	57.2222	38.3333
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013827	43.9516	32.2581	balaenoptera_musculus	ENSBMSP00010013875	60.5556	44.4444
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013859	0	0	balaenoptera_musculus	ENSBMSP00010013875	0	0
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010025967	37.7119	19.9153	balaenoptera_musculus	ENSBMSP00010013875	49.4444	26.1111
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010014470	35.2679	22.3214	balaenoptera_musculus	ENSBMSP00010013875	43.8889	27.7778

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	45	26.6667	sarcophilus_harrisii	ENSSHAP00000043123	28.125	16.6667
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	63.8889	50	callithrix_jacchus	ENSCJAP00000073454	56.0976	43.9024
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	63.8889	50.5556	cercocebus_atys	ENSCATP00000012268	57.7889	45.7286
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65.5556	51.6667	macaca_fascicularis	ENSMFAP00000017385	56.1905	44.2857
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	64.4444	51.1111	macaca_mulatta	ENSMMUP00000053576	44.6154	35.3846
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65	51.1111	macaca_nemestrina	ENSMNEP00000031743	55.4502	43.6019
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	56.6667	42.7778	papio_anubis	ENSPANP00000048484	41.9753	31.6872
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65	50.5556	mandrillus_leucophaeus	ENSMLEP00000018470	55.4502	43.128
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65.5556	49.4444	pan_paniscus	ENSPPAP00000026886	59	44.5
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65.5556	49.4444	pan_troglodytes	ENSPTRP00000083401	59	44.5
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65	50.5556	pongo_abelii	ENSPPYP00000041270	55.4502	43.128
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65	50	homo_sapiens	ENSP00000411754	63.9344	49.1803
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	78.3333	56.1111	canis_lupus_familiaris	ENSCAFP00845030766	56.4	40.4
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	76.1111	56.1111	vulpes_vulpes	ENSVVUP00000019753	45.5149	33.5548
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	72.7778	57.2222	ursus_americanus	ENSUAMP00000004881	59.276	46.6063
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	72.7778	57.2222	ailuropoda_melanoleuca	ENSAMEP00000011384	52.4	41.2
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	71.1111	56.6667	mustela_putorius_furo	ENSMPUP00000013141	33.4204	26.6319
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	72.7778	58.8889	felis_catus	ENSFCAP00000059112	41.0658	33.2288
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	73.8889	61.1111	panthera_pardus	ENSPPRP00000009485	68.5567	56.701
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	92.7778	87.7778	delphinapterus_leucas	ENSDLEP00000014878	31.2734	29.588
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	93.3333	88.8889	tursiops_truncatus	ENSTTRP00000001189	94.382	89.8876
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	96.6667	93.3333	physeter_catodon	ENSPCTP00005011753	41.4286	40
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	64.4444	49.4444	procavia_capensis	ENSPCAP00000014600	66.6667	51.1494
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	61.1111	46.6667	mesocricetus_auratus	ENSMAUP00000010970	26.6344	20.339
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	82.2222	71.1111	camelus_dromedarius	ENSCDRP00005019466	34.9882	30.26
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	83.8889	72.2222	bos_taurus	ENSBTAP00000003115	39.2208	33.7662
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	66.1111	50	dipodomys_ordii	ENSDORP00000022770	31.3158	23.6842
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	60	52.7778	vicugna_pacos	ENSVPAP00000010345	85.0394	74.8031
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	82.7778	71.6667	sus_scrofa	ENSSSCP00000049864	61.3169	53.0864
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	85	76.1111	ovis_aries_rambouillet	ENSOARP00020015068	41.129	36.828
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	75	61.1111	equus_caballus	ENSECAP00000034895	54.4355	44.3548
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	63.8889	50	rhinopithecus_bieti	ENSRBIP00000010473	54.5024	42.654
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	68.3333	53.8889	cavia_porcellus	ENSCPOP00000008311	30	23.6585
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	49.4444	40	oryctolagus_cuniculus	ENSOCUP00000035226	17.5197	14.1732
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	75.5556	61.6667	equus_asinus	ENSEASP00005036918	43.7299	35.6913
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	61.1111	46.1111	mus_pahari	MGP_PahariEiJ_P0042359	24.8307	18.7359
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65.5556	52.7778	ictidomys_tridecemlineatus	ENSSTOP00000006364	56.7308	45.6731
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	66.6667	53.3333	nomascus_leucogenys	ENSNLEP00000018472	56.872	45.4976
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	93.8889	89.4444	phocoena_sinus	ENSPSNP00000013086	40.5276	38.6091
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	73.8889	58.3333	rhinolophus_ferrumequinum	ENSRFEP00010002311	62.1495	49.0654
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65.5556	55	pteropus_vampyrus	ENSPVAP00000008916	67.0455	56.25
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	66.6667	51.6667	marmota_marmota_marmota	ENSMMMP00000015540	51.7241	40.0862
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	60.5556	47.7778	nannospalax_galili	ENSNGAP00000019083	26.0143	20.5251
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	73.3333	57.2222	ursus_maritimus	ENSUMAP00000019740	62.5592	48.8152
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	56.1111	42.7778	mus_spretus	MGP_SPRETEiJ_P0040813	22.9545	17.5
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65	50.5556	cebus_imitator	ENSCCAP00000001319	54.9296	42.723
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	63.8889	47.2222	cricetulus_griseus_chok1gshd	ENSCGRP00001025355	27.845	20.5811
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	56.1111	43.8889	mus_spicilegus	ENSMSIP00000034718	22.9545	17.9545
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	60.5556	46.1111	sciurus_vulgaris	ENSSVLP00005019455	23.6957	18.0435
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	92.7778	87.7778	monodon_monoceros	ENSMMNP00015027558	32.7451	30.9804
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	55.5556	42.2222	urocitellus_parryii	ENSUPAP00010028216	46.5116	35.3488
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	45	27.7778	phascolarctos_cinereus	ENSPCIP00000049844	31.1538	19.2308
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	70	55.5556	neovison_vison	ENSNVIP00000001830	61.7647	49.0196
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	85.5556	75.5556	cervus_hanglu_yarkandensis	ENSCHYP00000021689	32.4895	28.692
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	44.4444	27.2222	vombatus_ursinus	ENSVURP00010031524	26.8456	16.443
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	56.6667	43.8889	mus_musculus	ENSMUSP00000135027	23.1818	17.9545
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	67.7778	53.8889	tupaia_belangeri	ENSTBEP00000001321	73.0539	58.0838
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	0	0	bison_bison_bison	ENSBBBP00000011591	0	0
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	82.7778	73.3333	bison_bison_bison	ENSBBBP00000011581	84.6591	75
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	65.5556	50	saimiri_boliviensis_boliviensis	ENSSBOP00000027153	49.789	37.9747
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	80	71.6667	catagonus_wagneri	ENSCWAP00000020400	36.1809	32.4121
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	85.5556	75.5556	capra_hircus	ENSCHIP00000032712	41.1765	36.3636
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	73.8889	61.6667	panthera_tigris_altaica	ENSPTIP00000009121	68.5567	57.2165
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	63.8889	50.5556	aotus_nancymaae	ENSANAP00000015030	51.3393	40.625
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	61.6667	47.2222	rattus_norvegicus	ENSRNOP00000095626	25	19.1441
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	83.8889	72.2222	bos_mutus	ENSBMUP00000000416	39.2208	33.7662
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	84.4444	72.7778	bos_grunniens	ENSBGRP00000004947	62.0408	53.4694
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	58.8889	47.2222	microtus_ochrogaster	ENSMOCP00000025473	25.2381	20.2381
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	85.5556	75	moschus_moschiferus	ENSMMSP00000021032	41.3979	36.2903
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	46.1111	25.5556	monodelphis_domestica	ENSMODP00000040505	31.9231	17.6923
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	56.1111	43.3333	mus_caroli	MGP_CAROLIEiJ_P0039006	22.9545	17.7273
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	78.3333	56.1111	canis_lupus_dingo	ENSCAFP00020003085	66.1972	47.4178
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	52.7778	37.7778	jaculus_jaculus	ENSJJAP00000014377	25.7453	18.4282
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	66.1111	52.2222	chlorocebus_sabaeus	ENSCSAP00000002661	56.3981	44.5498
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	61.1111	45	peromyscus_maniculatus_bairdii	ENSPEMP00000000666	25.1716	18.5355
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	67.2222	52.2222	heterocephalus_glaber_female	ENSHGLP00000024290	58.4541	45.4106
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	64.4444	50	rhinopithecus_roxellana	ENSRROP00000006181	50.4348	39.1304
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	68.8889	51.1111	loxodonta_africana	ENSLAFP00000026875	33.6957	25
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	66.1111	53.3333	chinchilla_lanigera	ENSCLAP00000024206	58.9109	47.5248
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	66.6667	50.5556	carlito_syrichta	ENSTSYP00000023224	66.2983	50.2762
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	83.8889	72.2222	bos_indicus_hybrid	ENSBIXP00005043951	38.1313	32.8283
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	47.2222	27.7778	callorhinchus_milii	ENSCMIP00000004961	40.4762	23.8095
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	42.7778	26.1111	latimeria_chalumnae	ENSLACP00000018020	22.3837	13.6628
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	45	28.3333	lepisosteus_oculatus	ENSLOCP00000004258	29.6703	18.6813
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	46.1111	25	xenopus_tropicalis	ENSXETP00000073758	37.3874	20.2703
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	45.5556	28.8889	scleropages_formosus	ENSSFOP00015009596	41.4141	26.2626
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	42.7778	27.7778	paramormyrops_kingsleyae	ENSPKIP00000029857	37.1981	24.1546
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	47.2222	27.7778	anolis_carolinensis	ENSACAP00000018261	31.5985	18.5874
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	39.4444	19.4444	podarcis_muralis	ENSPMRP00000035742	33.8095	16.6667
ENSBMSG00010010140	balaenoptera_musculus	ENSBMSP00010013875	46.1111	28.8889	erpetoichthys_calabaricus	ENSECRP00000021015	31.8008	19.9234

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression