RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBMSG00010010126	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4175 bases	Strand	Plus strand
Position	10 : 95263441 - 95267615	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBMSP00010013859	APOBEC_N	PF08210	4.2e-51	1
ENSBMSP00010013859	APOBEC_C	PF05240	3.2e-32	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBMST00010015375	723	211aa	ENSBMSP00010013859

Gene Model

Click here to download ENSBMSG00010010126's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBMSG00010010126's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010026010	1.00503	0.502513	balaenoptera_musculus	ENSBMSP00010013859	0.947867	0.473934
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013827	2.82258	2.82258	balaenoptera_musculus	ENSBMSP00010013859	3.31754	3.31754
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013875	0	0	balaenoptera_musculus	ENSBMSP00010013859	0	0
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010025967	3.38983	1.27119	balaenoptera_musculus	ENSBMSP00010013859	3.79147	1.4218
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010014470	8.03571	3.125	balaenoptera_musculus	ENSBMSP00010013859	8.53081	3.31754

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	1.89573	0.947867	sarcophilus_harrisii	ENSSHAP00000043123	1.38889	0.694444
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	53.5545	37.4408	dasypus_novemcinctus	ENSDNOP00000022598	31.6527	22.1289
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	50.7109	38.8626	cercocebus_atys	ENSCATP00000019442	29.0761	22.2826
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.2417	47.3934	cercocebus_atys	ENSCATP00000041220	65.7895	52.6316
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	54.5024	40.2844	macaca_fascicularis	ENSMFAP00000052254	23.9583	17.7083
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	58.2938	45.0237	macaca_nemestrina	ENSMNEP00000045340	64.7368	50
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	62.0853	46.4455	macaca_nemestrina	ENSMNEP00000040950	33.1646	24.8101
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	57.8199	45.4976	papio_anubis	ENSPANP00000055526	60.6965	47.7612
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	62.0853	49.763	mandrillus_leucophaeus	ENSMLEP00000010909	35.1206	28.1501
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.7156	47.8673	mandrillus_leucophaeus	ENSMLEP00000025602	66.3158	53.1579
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.2417	46.4455	gorilla_gorilla	ENSGGOP00000019427	62.1891	48.7562
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	63.5071	49.763	gorilla_gorilla	ENSGGOP00000013413	35.9249	28.1501
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	57.8199	46.4455	pan_paniscus	ENSPPAP00000003356	64.2105	51.5789
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	60.6635	46.9194	pan_paniscus	ENSPPAP00000009967	39.8754	30.8411
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	62.5592	50.237	pan_troglodytes	ENSPTRP00000090414	35.3887	28.4182
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	60.6635	46.9194	pan_troglodytes	ENSPTRP00000065294	32.4873	25.1269
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	62.0853	49.763	pongo_abelii	ENSPPYP00000041985	35.1206	28.1501
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	57.8199	45.4976	pongo_abelii	ENSPPYP00000013199	64.2105	50.5263
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	62.5592	49.763	homo_sapiens	ENSP00000309749	35.3887	28.1501
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.7156	46.4455	homo_sapiens	ENSP00000216099	32.6425	25.3886
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	58.2938	46.4455	homo_sapiens	ENSP00000355340	64.7368	51.5789
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	51.1848	38.8626	vulpes_vulpes	ENSVVUP00000019758	61.0169	46.3277
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	57.346	43.6019	ursus_americanus	ENSUAMP00000004887	67.9775	51.6854
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.2417	47.8673	panthera_leo	ENSPLOP00000027854	66.8449	54.0107
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.7156	47.8673	panthera_pardus	ENSPPRP00000009193	67.3797	54.0107
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	54.9763	38.8626	microcebus_murinus	ENSMICP00000044232	56.5854	40
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	64.9289	52.6066	sus_scrofa	ENSSSCP00000038941	51.1194	41.4179
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	51.1848	34.5972	otolemur_garnettii	ENSOGAP00000021125	30.7692	20.7977
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.2417	41.2322	otolemur_garnettii	ENSOGAP00000015570	32.8084	22.8346
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	47.8673	36.9668	otolemur_garnettii	ENSOGAP00000021819	28.6119	22.0963
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	61.6114	50.7109	equus_caballus	ENSECAP00000027876	22.3752	18.4165
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	61.1374	46.9194	rhinopithecus_bieti	ENSRBIP00000013574	35.1499	26.9755
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.2417	47.3934	rhinopithecus_bieti	ENSRBIP00000037423	35.4108	28.3286
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	61.1374	48.8152	rhinopithecus_bieti	ENSRBIP00000012693	35.6354	28.453
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	60.6635	48.8152	equus_asinus	ENSEASP00005058077	32.9897	26.5464
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	48.8152	40.7583	equus_asinus	ENSEASP00005060941	57.2222	47.7778
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	61.1374	49.2891	equus_asinus	ENSEASP00005038789	39.8148	32.0988
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.2417	48.3412	equus_asinus	ENSEASP00005027361	32.2165	26.2887
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	52.1327	40.7583	nomascus_leucogenys	ENSNLEP00000028969	30.137	23.5616
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	58.7678	46.9194	nomascus_leucogenys	ENSNLEP00000046008	65.2632	52.1053
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.7156	49.2891	rhinolophus_ferrumequinum	ENSRFEP00010002335	63.3166	52.2613
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	46.4455	35.545	pteropus_vampyrus	ENSPVAP00000008915	40	30.6122
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	48.3412	37.4408	marmota_marmota_marmota	ENSMMMP00000015611	50.495	39.1089
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	58.7678	45.0237	ursus_maritimus	ENSUMAP00000019746	58.7678	45.0237
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	57.8199	45.4976	cebus_imitator	ENSCCAP00000026256	55.2036	43.4389
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.2417	43.128	myotis_lucifugus	ENSMLUP00000017607	40.4531	29.4498
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	1.4218	0.947867	phascolarctos_cinereus	ENSPCIP00000049844	1.15385	0.769231
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	52.1327	40.2844	neovison_vison	ENSNVIP00000001831	63.9535	49.4186
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	1.89573	0.947867	vombatus_ursinus	ENSVURP00010031524	1.34228	0.671141
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	57.346	45.0237	saimiri_boliviensis_boliviensis	ENSSBOP00000033207	39.8026	31.25
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	42.654	33.1754	propithecus_coquereli	ENSPCOP00000020218	68.7023	53.4351
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	41.7062	33.1754	propithecus_coquereli	ENSPCOP00000012935	66.6667	53.0303
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	62.0853	48.8152	aotus_nancymaae	ENSANAP00000024763	33.9378	26.6839
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	2.36967	1.4218	monodelphis_domestica	ENSMODP00000040505	1.92308	1.15385
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	59.7156	42.654	prolemur_simus	ENSPSMP00000006323	31.4214	22.4439
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	62.5592	45.4976	canis_lupus_dingo	ENSCAFP00020003112	69.4737	50.5263
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	60.6635	47.3934	chlorocebus_sabaeus	ENSCSAP00000002677	34.5946	27.027
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	58.2938	45.4976	chlorocebus_sabaeus	ENSCSAP00000002694	64.7368	50.5263
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	57.346	39.3365	heterocephalus_glaber_female	ENSHGLP00000060665	30.5556	20.9596
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	56.872	41.7062	heterocephalus_glaber_female	ENSHGLP00000057408	53.3333	39.1111
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	61.6114	47.3934	rhinopithecus_roxellana	ENSRROP00000008207	34.7594	26.738
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	58.7678	46.9194	rhinopithecus_roxellana	ENSRROP00000011299	35.1275	28.0453
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	63.0332	49.2891	rhinopithecus_roxellana	ENSRROP00000009246	35.6568	27.882
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	56.3981	40.7583	carlito_syrichta	ENSTSYP00000028083	64.6739	46.7391
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	55.4502	42.1801	carlito_syrichta	ENSTSYP00000018841	31.5364	23.9892
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	55.9242	39.8104	carlito_syrichta	ENSTSYP00000014121	65.1934	46.4088
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	0.473934	0.473934	callorhinchus_milii	ENSCMIP00000004961	0.47619	0.47619
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	0.947867	0.473934	latimeria_chalumnae	ENSLACP00000018020	0.581395	0.290698
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	4.73934	2.8436	lepisosteus_oculatus	ENSLOCP00000004258	3.663	2.1978
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	1.4218	0.947867	xenopus_tropicalis	ENSXETP00000073758	1.35135	0.900901
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	0	0	scleropages_formosus	ENSSFOP00015009596	0	0
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	0.473934	0	paramormyrops_kingsleyae	ENSPKIP00000029857	0.483092	0
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	1.4218	0.947867	anolis_carolinensis	ENSACAP00000018261	1.11524	0.743494
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	3.31754	1.89573	podarcis_muralis	ENSPMRP00000035742	3.33333	1.90476
ENSBMSG00010010126	balaenoptera_musculus	ENSBMSP00010013859	1.89573	0.947867	erpetoichthys_calabaricus	ENSECRP00000021015	1.53257	0.766284

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression