Description

Ensembl ID ENSBIXG00005027698 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 5767 bases Strand Minus strand
Position 5 : 9495840 - 9501606 RNA binding domain APOBEC_N , APOBEC_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSBIXP00005043915 APOBEC_N PF08210 2.9e-50 1
ENSBIXP00005043915 APOBEC_C PF05240 2.8e-32 2
ENSBIXP00005025168 APOBEC_N PF08210 3.7e-38 1
ENSBIXP00005025168 APOBEC_C PF05240 8.5e-11 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSBIXT00005052890 609 202aa ENSBIXP00005043915
- ENSBIXT00005040746 558 181aa ENSBIXP00005025168

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050086101.507540.502513bos_indicus_hybridENSBIXP000050439151.485150.49505
ENSBIXG00005027698bos_indicus_hybridENSBIXP0000504389300bos_indicus_hybridENSBIXP0000504391500
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050330193.389831.69492bos_indicus_hybridENSBIXP000050439153.96041.9802
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050297257.589292.67857bos_indicus_hybridENSBIXP000050439158.415842.9703
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439518.838384.0404bos_indicus_hybridENSBIXP0000504391517.32677.92079

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439151.485150.990099sarcophilus_harrisiiENSSHAP000000431231.041670.694444
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439150.495050.49505panthera_pardusENSPPRP000000091230.523560.52356
ENSBIXG00005027698bos_indicus_hybridENSBIXP0000504391555.445540.099loxodonta_africanaENSLAFP0000002687530.434822.0109
ENSBIXG00005027698bos_indicus_hybridENSBIXP0000504391500procavia_capensisENSPCAP0000001460000
ENSBIXG00005027698bos_indicus_hybridENSBIXP0000504391515.841611.3861urocitellus_parryiiENSUPAP0001002821315.686311.2745
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439151.98020.49505monodelphis_domesticaENSMODP000000405051.538460.384615
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439151.485150.990099vombatus_ursinusENSVURP000100315241.006710.671141
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439151.485150.990099phascolarctos_cinereusENSPCIP000000498441.153850.769231
ENSBIXG00005027698bos_indicus_hybridENSBIXP0000504391589.108988.6139bos_grunniensENSBGRP0000000491493.7593.2292
ENSBIXG00005027698bos_indicus_hybridENSBIXP0000504391500pteropus_vampyrusENSPVAP0000001704100
ENSBIXG00005027698bos_indicus_hybridENSBIXP0000504391500pteropus_vampyrusENSPVAP0000001706600
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439150.495050.49505callorhinchus_miliiENSCMIP000000049610.476190.47619
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439150.495050.49505latimeria_chalumnaeENSLACP000000180200.2906980.290698
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439154.455451.9802lepisosteus_oculatusENSLOCP000000042583.29671.4652
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439150.9900990.49505xenopus_tropicalisENSXETP000000737580.9009010.45045
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439151.485150.990099erpetoichthys_calabaricusENSECRP000000210151.149430.766284
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439150.9900990.49505anolis_carolinensisENSACAP000000182610.7434940.371747
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439153.96042.47525podarcis_muralisENSPMRP000000357423.809522.38095
ENSBIXG00005027698bos_indicus_hybridENSBIXP000050439150.495050paramormyrops_kingsleyaeENSPKIP000000298570.4830920
ENSBIXG00005027698bos_indicus_hybridENSBIXP0000504391500scleropages_formosusENSSFOP0001500959600

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression