RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSBIXG00005009556	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1633 bases	Strand	Plus strand
Position	11 : 59991511 - 59993143	RNA binding domain	Ribosomal_S26e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBIXP00005003417	Ribosomal_S26e	PF01283	5.6e-36	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBIXT00005010363	336	111aa	ENSBIXP00005003417

Gene Model

Click here to download ENSBIXG00005009556's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBIXG00005009556's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005023132	71.9298	65.7895	bos_indicus_hybrid	ENSBIXP00005003417	73.8739	67.5676
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005027473	78.2609	69.5652	bos_indicus_hybrid	ENSBIXP00005003417	81.0811	72.0721
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005010565	72.8	66.4	bos_indicus_hybrid	ENSBIXP00005003417	81.982	74.7748
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005031548	79.1304	70.4348	bos_indicus_hybrid	ENSBIXP00005003417	81.982	72.973

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	61.2613	49.5495	sarcophilus_harrisii	ENSSHAP00000009778	47.2222	38.1944
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	72.0721	63.0631	dasypus_novemcinctus	ENSDNOP00000024983	69.5652	60.8696
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	72.0721	67.5676	dasypus_novemcinctus	ENSDNOP00000022010	70.7965	66.3717
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	73.8739	65.7658	erinaceus_europaeus	ENSEEUP00000009888	78.8462	70.1923
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	53.1532	39.6396	echinops_telfairi	ENSETEP00000005206	64.8352	48.3517
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	75.6757	70.2703	gorilla_gorilla	ENSGGOP00000012140	79.2453	73.5849
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	63.0631	56.7568	pan_troglodytes	ENSPTRP00000088740	76.087	68.4783
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	73.8739	66.6667	canis_lupus_familiaris	ENSCAFP00845029222	74.5455	67.2727
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	63.0631	54.955	vulpes_vulpes	ENSVVUP00000036083	67.3077	58.6538
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	55.8559	45.9459	felis_catus	ENSFCAP00000026298	61.3861	50.495
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	57.6577	48.6486	panthera_leo	ENSPLOP00000006911	61.5385	51.9231
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	66.6667	54.955	delphinapterus_leucas	ENSDLEP00000006388	74.7475	61.6162
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	76.5766	68.4685	equus_caballus	ENSECAP00000021737	57.8231	51.7007
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	63.0631	49.5495	sus_scrofa	ENSSSCP00000020474	64.8148	50.9259
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	90.991	89.1892	bos_taurus	ENSBTAP00000069876	97.1154	95.1923
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	71.1712	64.8649	oryctolagus_cuniculus	ENSOCUP00000047788	71.8182	65.4545
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	74.7748	66.6667	urocitellus_parryii	ENSUPAP00010019252	69.7479	62.1849
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	43.2432	35.1351	cricetulus_griseus_chok1gshd	ENSCGRP00001006773	48.9796	39.7959
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	58.5586	48.6486	rattus_norvegicus	ENSRNOP00000069182	60.7477	50.4673
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	62.1622	54.955	monodelphis_domestica	ENSMODP00000055579	49.2857	43.5714
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	64.8649	54.955	ursus_maritimus	ENSUMAP00000021971	71.2871	60.396
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	71.1712	vombatus_ursinus	ENSVURP00010021245	77.3913	68.6957
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	97.2973	97.2973	bison_bison_bison	ENSBBBP00000008290	97.2973	97.2973
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	67.5676	61.2613	carlito_syrichta	ENSTSYP00000034012	73.5294	66.6667
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	59.4595	50.4505	propithecus_coquereli	ENSPCOP00000008814	70.9677	60.2151
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	55.8559	46.8468	cervus_hanglu_yarkandensis	ENSCHYP00000005667	54.386	45.614
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	74.7748	67.5676	canis_lupus_dingo	ENSCAFP00020011436	75.4545	68.1818
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	69.3694	59.4595	neovison_vison	ENSNVIP00000013250	69.3694	59.4595
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	57.6577	51.3514	nannospalax_galili	ENSNGAP00000000033	68.0851	60.6383
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	55.8559	47.7477	myotis_lucifugus	ENSMLUP00000005960	71.2644	60.9195
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	69.3694	58.5586	caenorhabditis_elegans	F39B2.6.1	65.812	55.5556
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	68.4685	55.8559	drosophila_melanogaster	FBpp0312181	66.6667	54.386
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	63.0631	46.8468	ciona_intestinalis	ENSCINP00000022141	58.8235	43.6975
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	76.5766	68.4685	eptatretus_burgeri	ENSEBUP00000027399	45.4545	40.6417
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	81.982	72.973	callorhinchus_milii	ENSCMIP00000003330	78.4483	69.8276
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	76.5766	65.7658	clupea_harengus	ENSCHAP00000000935	51.2048	43.9759
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	81.0811	73.8739	astyanax_mexicanus	ENSAMXP00000046073	78.2609	71.3043
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	81.0811	72.973	esox_lucius	ENSELUP00000007710	77.5862	69.8276
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	62.1622	52.2523	oncorhynchus_kisutch	ENSOKIP00005007486	54.3307	45.6693
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	62.1622	54.955	oncorhynchus_mykiss	ENSOMYP00000022730	61.6071	54.4643
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	69.3694	62.1622	salmo_trutta	ENSSTUP00000040821	63.1148	56.5574
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.0721	gadus_morhua	ENSGMOP00000005042	77.3913	69.5652
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	fundulus_heteroclitus	ENSFHEP00000007065	73.3333	66.6667
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.973	poecilia_reticulata	ENSPREP00000018865	77.193	71.0526
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	76.5766	67.5676	xiphophorus_maculatus	ENSXMAP00000020589	67.4603	59.5238
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	oryzias_latipes	ENSORLP00000001910	78.0702	71.0526
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	cyclopterus_lumpus	ENSCLMP00005022106	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	73.8739	oreochromis_niloticus	ENSONIP00000024003	59.7315	55.0336
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	haplochromis_burtoni	ENSHBUP00000026012	59.7315	54.3624
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	astatotilapia_calliptera	ENSACLP00000036906	59.7315	54.3624
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	sparus_aurata	ENSSAUP00010046153	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	78.3784	72.0721	lates_calcarifer	ENSLCAP00010038689	75.6522	69.5652
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	71.1712	xenopus_tropicalis	ENSXETP00000084273	73.9496	66.3866
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	75.6757	68.4685	dicentrarchus_labrax	ENSDLAP00005011862	75.6757	68.4685
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	78.3784	69.3694	anolis_carolinensis	ENSACAP00000005170	51.7857	45.8333
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	cyprinodon_variegatus	ENSCVAP00000000376	68.2171	62.0155
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	53.1532	45.9459	geospiza_fortis	ENSGFOP00000006655	64.8352	56.044
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	63.0631	46.8468	saccharomyces_cerevisiae	YER131W	58.8235	43.6975
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	63.0631	46.8468	saccharomyces_cerevisiae	YGL189C	58.8235	43.6975
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	scophthalmus_maximus	ENSSMAP00000070672	76.5217	69.5652
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	gasterosteus_aculeatus	ENSGACP00000000955	76.5217	69.5652
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	poecilia_latipinna	ENSPLAP00000027184	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	amphiprion_percula	ENSAPEP00000022814	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	nothobranchius_furzeri	ENSNFUP00015021407	76.5217	69.5652
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	75.6757	66.6667	cottoperca_gobio	ENSCGOP00000005490	66.6667	58.7302
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	81.0811	72.973	tetraodon_nigroviridis	ENSTNIP00000017621	78.2609	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	81.0811	72.973	oryzias_javanicus	ENSOJAP00000004472	78.2609	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	77.4775	69.3694	taeniopygia_guttata	ENSTGUP00000031990	39.2694	35.1598
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	78.3784	68.4685	taeniopygia_guttata	ENSTGUP00000021255	62.5899	54.6763
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	betta_splendens	ENSBSLP00000039733	73.9496	67.2269
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	48.6486	41.4414	chelonoidis_abingdonii	ENSCABP00000008264	73.9726	63.0137
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	63.964	51.3514	chelonoidis_abingdonii	ENSCABP00000007664	57.7236	46.3415
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	78.3784	70.2703	stegastes_partitus	ENSSPAP00000016519	63.9706	57.3529
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	45.045	41.4414	struthio_camelus_australis	ENSSCUP00000025118	43.8596	40.3509
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	amphiprion_ocellaris	ENSAOCP00000004163	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	45.045	41.4414	ficedula_albicollis	ENSFALP00000020802	36.2319	33.3333
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	larimichthys_crocea	ENSLCRP00005009509	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	81.0811	74.7748	myripristis_murdjan	ENSMMDP00005046784	78.2609	72.1739
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	77.4775	67.5676	myripristis_murdjan	ENSMMDP00005000662	64.6617	56.391
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	78.3784	70.2703	strigops_habroptila	ENSSHBP00005017009	47.8022	42.8571
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	45.9459	42.3423	oncorhynchus_tshawytscha	ENSOTSP00005062660	65.3846	60.2564
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	kryptolebias_marmoratus	ENSKMAP00000026273	63.7681	57.971
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	sander_lucioperca	ENSSLUP00000040919	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	71.1712	seriola_lalandi_dorsalis	ENSSLDP00000032818	75.2137	67.5214
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	77.4775	68.4685	acanthochromis_polyacanthus	ENSAPOP00000012661	62.3188	55.0725
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	73.8739	amphilophus_citrinellus	ENSACIP00000029656	77.193	71.9298
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	poecilia_formosa	ENSPFOP00000001551	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	63.0631	46.8468	ciona_savignyi	ENSCSAVP00000006313	58.8235	43.6975
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	mastacembelus_armatus	ENSMAMP00000060143	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	78.3784	71.1712	labrus_bergylta	ENSLBEP00000024990	75.6522	68.6957
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.973	anabas_testudineus	ENSATEP00000066817	77.3913	70.4348
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	80.1802	72.0721	oryzias_melastigma	ENSOMEP00000008366	65.4412	58.8235
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	81.982	74.7748	pygocentrus_nattereri	ENSPNAP00000034763	79.1304	72.1739
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	neolamprologus_brichardi	ENSNBRP00000022266	42.9268	39.0244
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	seriola_dumerili	ENSSDUP00000010222	76.5217	69.5652
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	62.1622	54.0541	hucho_hucho	ENSHHUP00000053059	38.9831	33.8983
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	75.6757	68.4685	takifugu_rubripes	ENSTRUP00000030482	75.6757	68.4685
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	78.3784	71.1712	cynoglossus_semilaevis	ENSCSEP00000005492	75.6522	68.6957
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	78.3784	72.0721	hippocampus_comes	ENSHCOP00000018716	76.3158	70.1754
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	79.2793	72.0721	pundamilia_nyererei	ENSPNYP00000002279	65.1852	59.2593
ENSBIXG00005009556	bos_indicus_hybrid	ENSBIXP00005003417	81.0811	72.973	oryzias_sinensis	ENSOSIP00000019396	54.2169	48.7952

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression