RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSBIXG00005004195	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	892 bases	Strand	Minus strand
Position	3 : 73102177 - 73103068	RNA binding domain	Ribosomal_S3Ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBIXP00005041518	Ribosomal_S3Ae	PF01015	1.6e-23	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBIXT00005035562	288	95aa	ENSBIXP00005041518

Gene Model

Click here to download ENSBIXG00005004195's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBIXG00005004195's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBIXG00005004195

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBIXG00005004195	bos_indicus_hybrid	ENSBIXP00005041518	87.3684	83.1579	delphinapterus_leucas	ENSDLEP00000019197	88.2979	84.0426
ENSBIXG00005004195	bos_indicus_hybrid	ENSBIXP00005041518	97.8947	97.8947	bos_taurus	ENSBTAP00000066637	97.8947	97.8947
ENSBIXG00005004195	bos_indicus_hybrid	ENSBIXP00005041518	95.7895	95.7895	bison_bison_bison	ENSBBBP00000019479	95.7895	95.7895
ENSBIXG00005004195	bos_indicus_hybrid	ENSBIXP00005041518	91.5789	87.3684	phascolarctos_cinereus	ENSPCIP00000025364	87.8788	83.8384
ENSBIXG00005004195	bos_indicus_hybrid	ENSBIXP00005041518	95.7895	94.7368	bos_mutus	ENSBMUP00000026283	95.7895	94.7368

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression