RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSBBBG00000008150	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3414 bases	Strand	Plus strand
Position	KN265201.1 : 7306147 - 7309560	RNA binding domain	Nop10p
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSBBBP00000005802	Nop10p	PF04135	5.4e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSBBBT00000005530	195	64aa	ENSBBBP00000005802

Gene Model

Click here to download ENSBBBG00000008150's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSBBBG00000008150's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBBBG00000008150

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSBBBG00000008150	bison_bison_bison	ENSBBBP00000005802	100	100	bos_taurus	ENSBTAP00000062724	100	100
ENSBBBG00000008150	bison_bison_bison	ENSBBBP00000005802	92.1875	82.8125	capra_hircus	ENSCHIP00000003593	92.1875	82.8125
ENSBBBG00000008150	bison_bison_bison	ENSBBBP00000005802	90.625	84.375	ovis_aries_rambouillet	ENSOARP00020012618	90.625	84.375
ENSBBBG00000008150	bison_bison_bison	ENSBBBP00000005802	65.625	54.6875	marmota_marmota_marmota	ENSMMMP00000006917	64.6154	53.8462
ENSBBBG00000008150	bison_bison_bison	ENSBBBP00000005802	100	100	bos_mutus	ENSBMUP00000003413	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression