Description

Ensembl ID ENSAZOG00000017028 Gene ID Accession -
Symbol Alias - Full Name RNA polymerase I subunit A
Status Confidence Length 32181 bases Strand Plus strand
Position NOIK01000623.1 : 70980 - 103160 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSAZOP00000028382 RNA_pol_Rpb1_4 PF05000 6.3e-24 1
ENSAZOP00000028382 RNA_pol_Rpb1_1 PF04997 7.2e-20 2
ENSAZOP00000028382 RNA_pol_Rpb1_2 PF00623 1.4e-69 3
ENSAZOP00000028382 RNA_pol_Rpb1_3 PF04983 8.8e-20 4
ENSAZOP00000028361 RNA_pol_Rpb1_4 PF05000 8.4e-24 1
ENSAZOP00000028361 RNA_pol_Rpb1_1 PF04997 3.3e-26 2
ENSAZOP00000028361 RNA_pol_Rpb1_5 PF04998 2.9e-101 3
ENSAZOP00000028361 RNA_pol_Rpb1_2 PF00623 2.8e-69 4
ENSAZOP00000028361 RNA_pol_Rpb1_3 PF04983 7.4e-39 5
ENSAZOP00000028325 RNA_pol_Rpb1_4 PF05000 8.9e-24 1
ENSAZOP00000028325 RNA_pol_Rpb1_1 PF04997 5.9e-26 2
ENSAZOP00000028325 RNA_pol_Rpb1_5 PF04998 2.8e-101 3
ENSAZOP00000028325 RNA_pol_Rpb1_2 PF00623 2.9e-69 4
ENSAZOP00000028325 RNA_pol_Rpb1_3 PF04983 7.5e-39 5
ENSAZOP00000028373 RNA_pol_Rpb1_4 PF05000 9.3e-24 1
ENSAZOP00000028373 RNA_pol_Rpb1_1 PF04997 2.5e-24 2
ENSAZOP00000028373 RNA_pol_Rpb1_5 PF04998 2.1e-101 3
ENSAZOP00000028373 RNA_pol_Rpb1_2 PF00623 2.6e-69 4
ENSAZOP00000028373 RNA_pol_Rpb1_3 PF04983 6.9e-20 5
ENSAZOP00000028362 RNA_pol_Rpb1_4 PF05000 9.5e-24 1
ENSAZOP00000028362 RNA_pol_Rpb1_1 PF04997 5.7e-26 2
ENSAZOP00000028362 RNA_pol_Rpb1_5 PF04998 2.6e-101 3
ENSAZOP00000028362 RNA_pol_Rpb1_2 PF00623 2.9e-69 4
ENSAZOP00000028362 RNA_pol_Rpb1_3 PF04983 7.3e-39 5
ENSAZOP00000028374 RNA_pol_Rpb1_4 PF05000 9.8e-24 1
ENSAZOP00000028374 RNA_pol_Rpb1_1 PF04997 7.1e-26 2
ENSAZOP00000028374 RNA_pol_Rpb1_5 PF04998 1.6e-101 3
ENSAZOP00000028374 RNA_pol_Rpb1_2 PF00623 2.7e-69 4
ENSAZOP00000028374 RNA_pol_Rpb1_3 PF04983 6.6e-39 5
ENSAZOP00000028364 RNA_pol_Rpb1_4 PF05000 9.8e-24 1
ENSAZOP00000028364 RNA_pol_Rpb1_1 PF04997 4.6e-24 2
ENSAZOP00000028364 RNA_pol_Rpb1_5 PF04998 2.2e-101 3
ENSAZOP00000028364 RNA_pol_Rpb1_2 PF00623 2.8e-69 4
ENSAZOP00000028364 RNA_pol_Rpb1_3 PF04983 7.1e-39 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSAZOT00000030345 5115 1704aa ENSAZOP00000028325
- ENSAZOT00000030383 5064 1687aa ENSAZOP00000028361
- ENSAZOT00000030384 5061 1686aa ENSAZOP00000028362
- ENSAZOT00000030386 4992 1663aa ENSAZOP00000028364
- ENSAZOT00000030395 4860 1619aa ENSAZOP00000028373
- ENSAZOT00000030396 4821 1606aa ENSAZOP00000028374
- ENSAZOT00000030404 2856 951aa ENSAZOP00000028382

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAZOG00000017028

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAZOG00000017028

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression