Description

Ensembl ID ENSAZOG00000006075 Gene ID Accession -
Symbol Alias - Full Name UPF2 regulator of nonsense mediated mRNA decay
Status Confidence Length 43469 bases Strand Minus strand
Position NOIK01000451.1 : 574206 - 617674 RNA binding domain Upf2 , MIF4G
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSAZOP00000009864 Upf2 PF04050 1.6e-33 1
ENSAZOP00000009864 MIF4G PF02854 2.8e-68 2
ENSAZOP00000009864 MIF4G PF02854 2.8e-68 3
ENSAZOP00000009825 Upf2 PF04050 1.1e-32 1
ENSAZOP00000009825 MIF4G PF02854 1.1e-66 2
ENSAZOP00000009825 MIF4G PF02854 1.1e-66 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSAZOT00000010488 2709 902aa ENSAZOP00000009825
- ENSAZOT00000010531 2196 731aa ENSAZOP00000009864

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAZOG00000006075

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAZOG00000006075

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression