RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSATEG00000010271	Gene ID	113150258	Accession	-
Symbol		Alias	-	Full Name	zinc finger RNA binding protein
Status	Confidence	Length	19518 bases	Strand	Minus strand
Position	9 : 1206036 - 1225553	RNA binding domain	zf-met , DZF
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSATEP00000014799	zf-met	PF12874	1e-20	1
ENSATEP00000014799	zf-met	PF12874	1e-20	2
ENSATEP00000014799	zf-met	PF12874	1e-20	3
ENSATEP00000014799	DZF	PF07528	6e-73	4
ENSATEP00000042997	zf-met	PF12874	3.9e-21	1
ENSATEP00000042997	zf-met	PF12874	3.9e-21	2
ENSATEP00000042997	zf-met	PF12874	3.9e-21	3
ENSATEP00000043053	zf-met	PF12874	9.9e-21	1
ENSATEP00000043053	zf-met	PF12874	9.9e-21	2
ENSATEP00000043053	zf-met	PF12874	9.9e-21	3
ENSATEP00000043053	DZF	PF07528	9.4e-52	4
ENSATEP00000048502	zf-met	PF12874	7.1e-21	1
ENSATEP00000048502	zf-met	PF12874	7.1e-21	2
ENSATEP00000048502	zf-met	PF12874	7.1e-21	3
ENSATEP00000048502	DZF	PF07528	4.7e-73	4
ENSATEP00000051602	zf-met	PF12874	9.6e-21	1
ENSATEP00000051602	zf-met	PF12874	9.6e-21	2
ENSATEP00000051602	zf-met	PF12874	9.6e-21	3
ENSATEP00000051602	DZF	PF07528	5.8e-73	4
ENSATEP00000062082	zf-met	PF12874	9.4e-21	1
ENSATEP00000062082	zf-met	PF12874	9.4e-21	2
ENSATEP00000062082	zf-met	PF12874	9.4e-21	3
ENSATEP00000062082	DZF	PF07528	9.1e-52	4
ENSATEP00000066741	zf-met	PF12874	8.2e-21	1
ENSATEP00000066741	zf-met	PF12874	8.2e-21	2
ENSATEP00000066741	zf-met	PF12874	8.2e-21	3
ENSATEP00000066741	DZF	PF07528	5.3e-73	4

Showing 1 to 27 of 27 entries

Pubmed ID	Full Name	Cell	Author	Time	Doi
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Pubmed ID	Title	Author	Time	Journal
No data available in table

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
-	ENSATET00000015033	4206	1074aa	ENSATEP00000014799
-	ENSATET00000042412	4173	1063aa	ENSATEP00000043053
-	ENSATET00000067394	4152	1056aa	ENSATEP00000051602
-	ENSATET00000054294	3879	965aa	ENSATEP00000048502
-	ENSATET00000070403	3515	1043aa	ENSATEP00000062082
-	ENSATET00000049585	3410	1008aa	ENSATEP00000066741
-	ENSATET00000070333	3061	798aa	ENSATEP00000042997

Showing 1 to 7 of 7 entries

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Gene Model

Click here to download ENSATEG00000010271's gene model file

ensgID	Trait	pValue	Pubmed ID
No data available in table

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID
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Protein-Protein Interaction (PPI)

Click here to download ENSATEG00000010271's PPI file

Paralogs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSATEG00000010271	anabas_testudineus	ENSATEP00000018382	23.4012	18.1686	anabas_testudineus	ENSATEP00000014799	14.9907	11.6387
ENSATEG00000010271	anabas_testudineus	ENSATEP00000018132	32.0958	24.0719	anabas_testudineus	ENSATEP00000014799	24.9534	18.7151
ENSATEG00000010271	anabas_testudineus	ENSATEP00000009952	21.4724	10.8384	anabas_testudineus	ENSATEP00000014799	9.77654	4.93482
ENSATEG00000010271	anabas_testudineus	ENSATEP00000067733	36.4029	26.4748	anabas_testudineus	ENSATEP00000014799	23.5568	17.1322
ENSATEG00000010271	anabas_testudineus	ENSATEP00000038903	35.9467	26.0355	anabas_testudineus	ENSATEP00000014799	22.6257	16.3873
ENSATEG00000010271	anabas_testudineus	ENSATEP00000031983	31.4645	22.7689	anabas_testudineus	ENSATEP00000014799	25.6052	18.5289
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014487	24.3295	12.6437	anabas_testudineus	ENSATEP00000014799	11.825	6.14525
ENSATEG00000010271	anabas_testudineus	ENSATEP00000019422	39.2765	20.9302	anabas_testudineus	ENSATEP00000014799	14.1527	7.5419
ENSATEG00000010271	anabas_testudineus	ENSATEP00000016934	26.1104	12.6514	anabas_testudineus	ENSATEP00000014799	18.0633	8.75233
ENSATEG00000010271	anabas_testudineus	ENSATEP00000037458	27.0345	13.7931	anabas_testudineus	ENSATEP00000014799	18.2495	9.31099

Showing 1 to 10 of 20 entries

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Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	53.1657	50.3724	fundulus_heteroclitus	ENSFHEP00000010624	94.3802	89.4215
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	13.8734	13.0354	fundulus_heteroclitus	ENSFHEP00000007257	96.7533	90.9091
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	93.5754	89.1061	xiphophorus_maculatus	ENSXMAP00000013416	94.1893	89.6907
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	93.4823	88.6406	poecilia_reticulata	ENSPREP00000017709	94.0956	89.2221
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	94.6927	90.689	cyclopterus_lumpus	ENSCLMP00005027778	94.2539	90.2688
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	92.5512	87.8957	oryzias_latipes	ENSORLP00000032722	93.4211	88.7218
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	96.1825	92.7374	oreochromis_niloticus	ENSONIP00000067621	96.3619	92.9104
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	89.4786	86.4991	astatotilapia_calliptera	ENSACLP00000024769	96.1962	92.993
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	95.9032	93.203	sparus_aurata	ENSSAUP00010026275	95.7249	93.0297
ENSATEG00000010271	anabas_testudineus	ENSATEP00000014799	10.2421	9.31099	haplochromis_burtoni	ENSHBUP00000011897	89.4309	81.3008

Showing 1 to 10 of 244 entries

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Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression