RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSARWG00000011438	Gene ID	112973989	Accession	-
Symbol		Alias	-	Full Name	PDX1 C-terminal inhibiting factor 1
Status	Confidence	Length	8751 bases	Strand	Plus strand
Position	PTFB01000001.1 : 12266259 - 12275009	RNA binding domain	PCIF1_WW
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSARWP00000016596	PCIF1_WW	PF12237	2.4e-72	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSARWT00000018901	2154	712aa	ENSARWP00000016596

Gene Model

Click here to download ENSARWG00000011438's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSARWG00000011438's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSARWG00000011438

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSARWG00000011438

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression