RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSARWG00000005416	Gene ID	112962576	Accession	-
Symbol		Alias	-	Full Name	pseudouridine synthase 1
Status	Confidence	Length	10125 bases	Strand	Plus strand
Position	PTFB01000016.1 : 4864573 - 4874697	RNA binding domain	PseudoU_synth_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSARWP00000007757	PseudoU_synth_1	PF01416	3.2e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSARWT00000008848	3711	401aa	ENSARWP00000007757

Gene Model

Click here to download ENSARWG00000005416's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSARWG00000005416's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSARWG00000005416

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSARWG00000005416

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression