Description

Ensembl ID ENSARWG00000002956 Gene ID 112968467 Accession -
Symbol Alias - Full Name chromodomain helicase DNA binding protein 6
Status Confidence Length 60569 bases Strand Minus strand
Position PTFB01000319.1 : 922732 - 983300 RNA binding domain ResIII , BRK
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSARWP00000006300 ResIII PF04851 1.7e-07 1
ENSARWP00000006300 BRK PF07533 1.7e-15 2
ENSARWP00000006196 ResIII PF04851 1.8e-07 1
ENSARWP00000006154 ResIII PF04851 1.9e-07 1
ENSARWP00000006195 ResIII PF04851 1.9e-07 1
ENSARWP00000006123 ResIII PF04851 1.9e-07 1
ENSARWP00000006106 ResIII PF04851 2e-07 1
ENSARWP00000006297 ResIII PF04851 3.2e-07 1
ENSARWP00000006297 BRK PF07533 3.2e-16 2
ENSARWP00000006289 ResIII PF04851 3.3e-07 1
ENSARWP00000006289 BRK PF07533 3.4e-16 2
ENSARWP00000006258 ResIII PF04851 3.5e-07 1
ENSARWP00000006258 BRK PF07533 1.5e-15 2
ENSARWP00000005346 ResIII PF04851 3.7e-07 1
ENSARWP00000005346 BRK PF07533 3.1e-16 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSARWT00000006135 6354 2117aa ENSARWP00000005346
- ENSARWT00000007008 7959 2652aa ENSARWP00000006106
- ENSARWT00000007027 7941 2646aa ENSARWP00000006123
- ENSARWT00000007064 7860 2619aa ENSARWP00000006154
- ENSARWT00000007106 7851 2616aa ENSARWP00000006195
- ENSARWT00000007107 7626 2541aa ENSARWP00000006196
- ENSARWT00000007174 6486 2161aa ENSARWP00000006258
- ENSARWT00000007209 6549 2182aa ENSARWP00000006289
- ENSARWT00000007217 6477 2158aa ENSARWP00000006297
- ENSARWT00000007220 7323 2440aa ENSARWP00000006300

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSARWG00000002956

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSARWG00000002956

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression