RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSAPOG00000018369	Gene ID	110962558	Accession	-
Symbol		Alias	-	Full Name	nuclear transport factor 2-like
Status	Confidence	Length	3770 bases	Strand	Plus strand
Position	MVNR01000004.1 : 545176 - 548945	RNA binding domain	NTF2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSAPOP00000031269	NTF2	PF02136	8.4e-29	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSAPOT00000024097	1197	130aa	ENSAPOP00000031269

Gene Model

Click here to download ENSAPOG00000018369's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSAPOG00000018369's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000001238	69.2913	55.9055	acanthochromis_polyacanthus	ENSAPOP00000031269	67.6923	54.6154
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000026468	38.4615	23.0769	acanthochromis_polyacanthus	ENSAPOP00000031269	42.3077	25.3846

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	93.8462	89.2308	fundulus_heteroclitus	ENSFHEP00000017836	93.8462	89.2308
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	90	86.1538	xiphophorus_maculatus	ENSXMAP00000003663	90	86.1538
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	89.2308	82.3077	oryzias_latipes	ENSORLP00000039531	70.303	64.8485
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	91.5385	87.6923	poecilia_reticulata	ENSPREP00000012525	91.5385	87.6923
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	83.8462	73.8462	cyclopterus_lumpus	ENSCLMP00005005552	83.8462	73.8462
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	99.2308	96.9231	oreochromis_niloticus	ENSONIP00000044616	99.2308	96.9231
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	99.2308	96.9231	astatotilapia_calliptera	ENSACLP00000022202	99.2308	96.9231
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	99.2308	96.9231	haplochromis_burtoni	ENSHBUP00000001213	99.2308	96.9231
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	93.8462	86.1538	sparus_aurata	ENSSAUP00010007611	93.8462	86.1538
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	90	83.8462	cyprinodon_variegatus	ENSCVAP00000019728	91.4062	85.1562
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	86.9231	80	lates_calcarifer	ENSLCAP00010030127	86.9231	80
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	89.2308	82.3077	oryzias_melastigma	ENSOMEP00000011721	89.9225	82.9457
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	99.2308	96.1538	neolamprologus_brichardi	ENSNBRP00000017346	99.2308	96.1538
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	97.6923	95.3846	seriola_dumerili	ENSSDUP00000015859	97.6923	95.3846
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	91.5385	87.6923	poecilia_formosa	ENSPFOP00000014665	91.5385	87.6923
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	94.6154	90.7692	kryptolebias_marmoratus	ENSKMAP00000009947	94.6154	90.7692
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	87.6923	80	scophthalmus_maximus	ENSSMAP00000012260	87.6923	80
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	94.6154	91.5385	labrus_bergylta	ENSLBEP00000036318	94.6154	91.5385
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	97.6923	96.1538	anabas_testudineus	ENSATEP00000066169	97.6923	96.1538
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	97.6923	95.3846	amphilophus_citrinellus	ENSACIP00000021047	97.6923	95.3846
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	97.6923	93.8462	betta_splendens	ENSBSLP00000035678	97.6923	93.8462
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	80.7692	68.4615	hippocampus_comes	ENSHCOP00000015560	78.9474	66.9173
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	99.2308	96.9231	pundamilia_nyererei	ENSPNYP00000015912	99.2308	96.9231
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	99.2308	98.4615	amphiprion_percula	ENSAPEP00000015525	99.2308	98.4615
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	99.2308	96.9231	maylandia_zebra	ENSMZEP00005004435	99.2308	96.9231
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	96.9231	94.6154	sander_lucioperca	ENSSLUP00000004513	96.9231	94.6154
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	97.6923	95.3846	seriola_lalandi_dorsalis	ENSSLDP00000017482	97.6923	95.3846
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	89.2308	82.3077	oryzias_javanicus	ENSOJAP00000046521	89.9225	82.9457
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	98.4615	95.3846	stegastes_partitus	ENSSPAP00000026051	98.4615	95.3846
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	82.3077	76.1538	larimichthys_crocea	ENSLCRP00005027486	79.2593	73.3333
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	99.2308	98.4615	amphiprion_ocellaris	ENSAOCP00000006701	99.2308	98.4615
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	89.2308	82.3077	oryzias_sinensis	ENSOSIP00000048076	89.9225	82.9457
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	96.1538	95.3846	cottoperca_gobio	ENSCGOP00000010796	96.1538	95.3846
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	98.4615	96.1538	mastacembelus_armatus	ENSMAMP00000021008	98.4615	96.1538
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	57.6923	36.1538	caenorhabditis_elegans	R05D11.3.1	56.391	35.3383
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	91.5385	87.6923	poecilia_latipinna	ENSPLAP00000015218	91.5385	87.6923
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	60.7692	43.0769	drosophila_melanogaster	FBpp0305904	60.7692	43.0769
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	62.3077	40.7692	drosophila_melanogaster	FBpp0080616	62.3077	40.7692
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	53.8462	39.2308	ciona_intestinalis	ENSCINP00000029956	51.0949	37.2263
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	69.2308	53.8462	gadus_morhua	ENSGMOP00000002243	69.2308	53.8462
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	69.2308	56.1538	myripristis_murdjan	ENSMMDP00005012745	68.7023	55.7252
ENSAPOG00000018369	acanthochromis_polyacanthus	ENSAPOP00000031269	56.9231	37.6923	saccharomyces_cerevisiae	YER009W	59.2	39.2

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression