Welcome to
RBP World!
Description
Ensembl ID | ENSAPOG00000002991 | Gene ID | 110970190 | Accession | - |
Symbol | rbm4.3 | Alias | - | Full Name | RNA-binding protein 4-like |
Status | Confidence | Length | 6647 bases | Strand | Plus strand |
Position | MVNR01002633.1 : 40543 - 47189 | RNA binding domain | RRM_5 , RRM_1 | ||
Summary | N.A. |
RNA binding domains (RBDs)
Protein | Domain | Pfam ID | E-value | Domain number |
---|---|---|---|---|
ENSAPOP00000001649 | RRM_5 | PF13893 | 2e-09 | 1 |
ENSAPOP00000001649 | RRM_5 | PF13893 | 2e-09 | 2 |
ENSAPOP00000001649 | RRM_1 | PF00076 | 8.1e-26 | 3 |
ENSAPOP00000001649 | RRM_1 | PF00076 | 8.1e-26 | 4 |
ENSAPOP00000001657 | RRM_5 | PF13893 | 2e-09 | 1 |
ENSAPOP00000001657 | RRM_5 | PF13893 | 2e-09 | 2 |
ENSAPOP00000001657 | RRM_1 | PF00076 | 8.1e-26 | 3 |
ENSAPOP00000001657 | RRM_1 | PF00076 | 8.1e-26 | 4 |
RNA binding proteomes (RBPomes)
Pubmed ID | Full Name | Cell | Author | Time | Doi |
---|
Literatures on RNA binding capacity
Pubmed ID | Title | Author | Time | Journal |
---|
Transcripts
Name | Transcript ID | bp | Protein | Translation ID |
---|---|---|---|---|
rbm4.3-201 | ENSAPOT00000014767 | 5646 | 339aa | ENSAPOP00000001657 |
rbm4.3-202 | ENSAPOT00000014790 | 5494 | 339aa | ENSAPOP00000001649 |
Phenotypes
ensgID | Trait | pValue | Pubmed ID |
---|
GWAS
ensgID | SNP | Chromosome | Position | Trait | PubmedID | Or or BEAT | EFO ID |
---|
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000002148 | 25.5618 | 13.764 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 26.8437 | 14.4543 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000029044 | 26.3158 | 14.0351 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 26.5487 | 14.1593 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000002276 | 26.0274 | 14.5205 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 28.0236 | 15.6342 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001976 | 26.7974 | 14.7059 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 24.1888 | 13.2743 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000022282 | 27.7778 | 13.1944 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 23.5988 | 11.2094 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000008395 | 9.30997 | 4.27163 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 25.0737 | 11.5044 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000031854 | 23.9521 | 12.5749 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 35.3982 | 18.5841 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000008697 | 34.8315 | 17.9775 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 27.4336 | 14.1593 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000012446 | 16.2562 | 6.15764 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 19.469 | 7.37463 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000004589 | 23.9748 | 11.6719 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 22.4189 | 10.9145 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000004858 | 19.4872 | 14.1026 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 22.4189 | 16.2242 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000026897 | 15.534 | 9.38511 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 28.3186 | 17.1091 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000031842 | 28.0967 | 14.1994 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 27.4336 | 13.8643 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000033414 | 16.7816 | 9.88506 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 21.5339 | 12.6844 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000029086 | 24.1636 | 12.2677 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 19.174 | 9.73451 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000028968 | 10.8239 | 4.68498 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 19.764 | 8.55457 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000020343 | 11.641 | 5.46985 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 24.4838 | 11.5044 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000000457 | 20.1474 | 11.0565 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 24.1888 | 13.2743 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000000665 | 27.2021 | 12.9534 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 30.9735 | 14.7493 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000024459 | 24.9364 | 12.2137 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 28.9086 | 14.1593 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000012828 | 26.943 | 11.9171 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 30.6785 | 13.5693 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000024601 | 26.9481 | 15.2597 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 24.4838 | 13.8643 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000024626 | 36.1702 | 23.4043 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 10.0295 | 6.48968 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000008252 | 36.1702 | 23.4043 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 10.0295 | 6.48968 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000022149 | 23.7822 | 12.6074 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 24.4838 | 12.9794 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000019902 | 23.4957 | 12.894 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 24.1888 | 13.2743 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000006424 | 15.7377 | 9.01639 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 28.3186 | 16.2242 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000025831 | 19.7628 | 12.4506 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 29.4985 | 18.5841 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000003008 | 23.3645 | 14.9533 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 14.7493 | 9.43953 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000025830 | 23.9394 | 11.8182 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 23.3038 | 11.5044 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000013874 | 25.7143 | 12.381 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 23.8938 | 11.5044 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000008007 | 27.7966 | 14.5763 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 24.1888 | 12.6844 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000009982 | 49.0476 | 37.381 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 60.767 | 46.3127 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000009997 | 69.1781 | 50 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 29.7935 | 21.5339 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001624 | 77.5862 | 68.6782 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 79.646 | 70.5015 |
Orthologs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 83.7758 | 75.5162 | fundulus_heteroclitus | ENSFHEP00000021123 | 81.3754 | 73.3524 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 82.8909 | 75.8112 | xiphophorus_maculatus | ENSXMAP00000039920 | 81.2139 | 74.2775 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 79.646 | 69.6165 | oryzias_latipes | ENSORLP00000014520 | 80.597 | 70.4478 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 82.5959 | 76.4012 | poecilia_reticulata | ENSPREP00000002908 | 80.9249 | 74.8555 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 84.9557 | 77.2861 | cyclopterus_lumpus | ENSCLMP00005035325 | 83.7209 | 76.1628 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.7109 | 74.3363 | oreochromis_niloticus | ENSONIP00000044023 | 77.3743 | 70.3911 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 89.6755 | 84.0708 | astatotilapia_calliptera | ENSACLP00000015613 | 84.4444 | 79.1667 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 89.6755 | 84.0708 | haplochromis_burtoni | ENSHBUP00000007569 | 88.3721 | 82.8488 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 88.7906 | 82.5959 | dicentrarchus_labrax | ENSDLAP00005072896 | 89.0533 | 82.8402 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 82.5959 | 76.4012 | cyprinodon_variegatus | ENSCVAP00000006897 | 81.6327 | 75.5102 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 87.6106 | 82.5959 | lates_calcarifer | ENSLCAP00010016991 | 73.6973 | 69.4789 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 79.941 | 71.6814 | oryzias_melastigma | ENSOMEP00000025004 | 80.1775 | 71.8935 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 84.9557 | 78.7611 | takifugu_rubripes | ENSTRUP00000051263 | 83.965 | 77.8426 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 90.5605 | 84.6608 | neolamprologus_brichardi | ENSNBRP00000015990 | 89.5044 | 83.6735 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 87.0207 | 82.3009 | seriola_dumerili | ENSSDUP00000025375 | 86.7647 | 82.0588 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 82.5959 | 76.6962 | poecilia_formosa | ENSPFOP00000006741 | 80.6916 | 74.928 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 83.1858 | 75.2212 | kryptolebias_marmoratus | ENSKMAP00000019543 | 81.0345 | 73.2759 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.7109 | 74.9263 | scophthalmus_maximus | ENSSMAP00000022308 | 82.1958 | 75.3709 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 56.3422 | 51.3274 | labrus_bergylta | ENSLBEP00000001307 | 87.2146 | 79.4521 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 89.0855 | 84.9557 | anabas_testudineus | ENSATEP00000028067 | 90.1493 | 85.9701 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 90.2655 | 85.2507 | amphilophus_citrinellus | ENSACIP00000027476 | 89.4737 | 84.5029 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 85.8407 | 78.1711 | betta_splendens | ENSBSLP00000023343 | 54.5966 | 49.7186 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.4159 | 71.0914 | hippocampus_comes | ENSHCOP00000022576 | 78.4091 | 68.4659 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 89.6755 | 83.4808 | pundamilia_nyererei | ENSPNYP00000024567 | 88.1159 | 82.029 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 96.1652 | 95.2802 | amphiprion_percula | ENSAPEP00000024288 | 95.8824 | 95 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 89.6755 | 84.0708 | maylandia_zebra | ENSMZEP00005038160 | 84.4444 | 79.1667 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.1209 | 74.3363 | maylandia_zebra | ENSMZEP00005009816 | 75.3425 | 69.0411 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 85.5457 | 80.531 | sander_lucioperca | ENSSLUP00000005775 | 84.5481 | 79.5918 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 86.7257 | 81.7109 | seriola_lalandi_dorsalis | ENSSLDP00000022006 | 86.4706 | 81.4706 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 76.4012 | 68.1416 | oryzias_javanicus | ENSOJAP00000049969 | 74.212 | 66.1891 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 94.3953 | 91.4454 | stegastes_partitus | ENSSPAP00000010566 | 80.402 | 77.8895 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 88.2006 | 82.0059 | larimichthys_crocea | ENSLCRP00005065461 | 87.6833 | 81.5249 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 95.8702 | 94.9853 | amphiprion_ocellaris | ENSAOCP00000004579 | 95.5882 | 94.7059 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 79.056 | 69.6165 | oryzias_sinensis | ENSOSIP00000002484 | 80.2395 | 70.6587 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 85.2507 | 78.7611 | cottoperca_gobio | ENSCGOP00000011755 | 76.8617 | 71.0106 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 79.646 | 71.6814 | nothobranchius_furzeri | ENSNFUP00015054147 | 79.646 | 71.6814 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 89.6755 | 84.6608 | mastacembelus_armatus | ENSMAMP00000006902 | 90.2077 | 85.1632 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 82.8909 | 76.6962 | poecilia_latipinna | ENSPLAP00000021947 | 80.9798 | 74.928 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 74.9263 | 63.4218 | lepisosteus_oculatus | ENSLOCP00000003242 | 67.1958 | 56.8783 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 77.5811 | 68.7316 | clupea_harengus | ENSCHAP00000009166 | 74.2938 | 65.8192 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 79.646 | 71.9764 | danio_rerio | ENSDARP00000117497 | 79.1789 | 71.5543 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 78.4661 | 71.0914 | carassius_auratus | ENSCARP00000025566 | 77.551 | 70.2624 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 79.351 | 69.3215 | carassius_auratus | ENSCARP00000120671 | 78.4257 | 68.5131 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 53.0973 | 45.4277 | astyanax_mexicanus | ENSAMXP00000049079 | 75 | 64.1667 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 21.5339 | 17.9941 | electrophorus_electricus | ENSEEEP00000011885 | 67.5926 | 56.4815 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 77.2861 | 67.2566 | ictalurus_punctatus | ENSIPUP00000034140 | 75.7225 | 65.896 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 78.7611 | 72.2714 | esox_lucius | ENSELUP00000052082 | 73.5537 | 67.4931 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.4159 | 73.4513 | oncorhynchus_kisutch | ENSOKIP00005007410 | 71.875 | 64.8438 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.4159 | 73.4513 | oncorhynchus_mykiss | ENSOMYP00000031948 | 71.6883 | 64.6753 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 66.0767 | 59.292 | salmo_trutta | ENSSTUP00000000788 | 70.8861 | 63.6076 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.4159 | 73.4513 | salmo_trutta | ENSSTUP00000102538 | 72.0627 | 65.0131 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 76.4012 | 70.5015 | gadus_morhua | ENSGMOP00000058317 | 71.3499 | 65.8402 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 74.3363 | 58.7021 | erpetoichthys_calabaricus | ENSECRP00000001938 | 71.7949 | 56.6952 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 77.8761 | 67.8466 | pygocentrus_nattereri | ENSPNAP00000007184 | 74.5763 | 64.9717 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.7109 | 73.4513 | hucho_hucho | ENSHHUP00000056462 | 72.1354 | 64.8438 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 78.7611 | 70.5015 | sinocyclocheilus_grahami | ENSSGRP00000099112 | 77.8426 | 69.6793 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 39.823 | 35.1032 | sinocyclocheilus_grahami | ENSSGRP00000002318 | 80.3571 | 70.8333 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 75.8112 | 65.7817 | denticeps_clupeoides | ENSDCDP00000001698 | 73.4286 | 63.7143 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 81.4159 | 73.4513 | oncorhynchus_tshawytscha | ENSOTSP00005033611 | 79.7688 | 71.9653 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 64.0118 | 57.2271 | oncorhynchus_tshawytscha | ENSOTSP00005036617 | 73.064 | 65.3199 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 74.6313 | 65.1917 | paramormyrops_kingsleyae | ENSPKIP00000023319 | 73.5465 | 64.2442 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 76.4012 | 64.3068 | scleropages_formosus | ENSSFOP00015024224 | 71.7452 | 60.3878 |
ENSAPOG00000002991 | acanthochromis_polyacanthus | ENSAPOP00000001657 | 79.056 | 69.6165 | cyprinus_carpio_carpio | ENSCCRP00000112525 | 78.1341 | 68.8047 |
Gene Ontology
Go ID | Go term | No. evidence | Entries | Species | Category |
---|