RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSAPOG00000000128	Gene ID	110964067	Accession	-
Symbol		Alias	-	Full Name	zinc finger protein 180-like
Status	Confidence	Length	4412 bases	Strand	Minus strand
Position	MVNR01001231.1 : 112857 - 117268	RNA binding domain	zf-met
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSAPOP00000023444	zf-met	PF12874	3.3e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSAPOT00000011269	2154	338aa	ENSAPOP00000023444

Gene Model

Click here to download ENSAPOG00000000128's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSAPOG00000000128's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000004372	8.92449	4.95805	acanthochromis_polyacanthus	ENSAPOP00000023444	34.6154	19.2308
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000018190	25.9259	18.0556	acanthochromis_polyacanthus	ENSAPOP00000023444	33.1361	23.0769
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023114	16.0356	9.57684	acanthochromis_polyacanthus	ENSAPOP00000023444	21.3018	12.7219
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000025949	18.1102	11.9685	acanthochromis_polyacanthus	ENSAPOP00000023444	34.0237	22.4852
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000011886	19.7115	13.2212	acanthochromis_polyacanthus	ENSAPOP00000023444	24.2604	16.2722
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000009022	13.5135	9.18919	acanthochromis_polyacanthus	ENSAPOP00000023444	22.1893	15.0888
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000019151	28.4	19.2	acanthochromis_polyacanthus	ENSAPOP00000023444	21.0059	14.2012
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000011926	15.016	10.7029	acanthochromis_polyacanthus	ENSAPOP00000023444	27.8107	19.8225
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000009620	15.1125	9.96785	acanthochromis_polyacanthus	ENSAPOP00000023444	27.8107	18.3432
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000001260	16.5247	10.9029	acanthochromis_polyacanthus	ENSAPOP00000023444	28.6982	18.9349
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023899	18.6715	13.465	acanthochromis_polyacanthus	ENSAPOP00000023444	30.7692	22.1893
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000025562	5.97345	3.31858	acanthochromis_polyacanthus	ENSAPOP00000023444	7.98817	4.43787
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000012114	5.86292	3.30306	acanthochromis_polyacanthus	ENSAPOP00000023444	21.0059	11.8343
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023501	5.46401	3.03556	acanthochromis_polyacanthus	ENSAPOP00000023444	18.6391	10.355
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000000890	4.53012	2.98795	acanthochromis_polyacanthus	ENSAPOP00000023444	27.8107	18.3432
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000009047	6.98985	5.74972	acanthochromis_polyacanthus	ENSAPOP00000023444	18.3432	15.0888
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000019046	10.8475	6.77966	acanthochromis_polyacanthus	ENSAPOP00000023444	28.4024	17.7515
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000032442	6.43739	4.14462	acanthochromis_polyacanthus	ENSAPOP00000023444	21.5976	13.9053
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000027979	17.6568	11.5512	acanthochromis_polyacanthus	ENSAPOP00000023444	31.6568	20.7101
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000007736	10.6667	7.83333	acanthochromis_polyacanthus	ENSAPOP00000023444	18.9349	13.9053
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000011675	13.4185	8.46645	acanthochromis_polyacanthus	ENSAPOP00000023444	24.8521	15.6805
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000017199	16.1232	9.23913	acanthochromis_polyacanthus	ENSAPOP00000023444	26.3314	15.0888
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000012964	9.97877	6.58174	acanthochromis_polyacanthus	ENSAPOP00000023444	27.8107	18.3432
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000019979	20.9052	13.5776	acanthochromis_polyacanthus	ENSAPOP00000023444	28.6982	18.6391
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000014952	5.98444	3.29144	acanthochromis_polyacanthus	ENSAPOP00000023444	29.5858	16.2722
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000026300	12.3497	7.97814	acanthochromis_polyacanthus	ENSAPOP00000023444	33.432	21.5976
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000021176	14.9341	9.22401	acanthochromis_polyacanthus	ENSAPOP00000023444	30.1775	18.6391
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023300	13.0781	8.61244	acanthochromis_polyacanthus	ENSAPOP00000023444	24.2604	15.9763
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000001340	6.55967	4.2568	acanthochromis_polyacanthus	ENSAPOP00000023444	27.8107	18.0473
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000020194	7.53481	4.5045	acanthochromis_polyacanthus	ENSAPOP00000023444	27.2189	16.2722
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000011800	21.875	17.0455	acanthochromis_polyacanthus	ENSAPOP00000023444	22.7811	17.7515
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000033566	13.2988	9.49914	acanthochromis_polyacanthus	ENSAPOP00000023444	22.7811	16.2722
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000017591	13.6364	9.09091	acanthochromis_polyacanthus	ENSAPOP00000023444	30.1775	20.1183

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	62.1302	50.5917	fundulus_heteroclitus	ENSFHEP00000033134	65.4206	53.271
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	81.3609	72.7811	oreochromis_niloticus	ENSONIP00000068025	69.9746	62.5954
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	81.0651	72.4852	neolamprologus_brichardi	ENSNBRP00000017931	69.7201	62.341
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	77.5148	66.8639	seriola_dumerili	ENSSDUP00000025648	77.0588	66.4706
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	59.4675	50.8876	poecilia_formosa	ENSPFOP00000012943	58.2609	49.8551
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	71.5976	61.2426	scophthalmus_maximus	ENSSMAP00000051822	51.9313	44.4206
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	64.497	53.2544	nothobranchius_furzeri	ENSNFUP00015001181	58.6021	48.3871
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	29.8817	18.3432	erpetoichthys_calabaricus	ENSECRP00000000687	22.5446	13.8393
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	30.1775	18.3432	erpetoichthys_calabaricus	ENSECRP00000004428	24.5783	14.9398
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	26.9231	18.6391	erpetoichthys_calabaricus	ENSECRP00000003110	16.7587	11.6022
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	30.4734	19.8225	erpetoichthys_calabaricus	ENSECRP00000028198	24.8193	16.1446
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	31.9527	19.2308	erpetoichthys_calabaricus	ENSECRP00000013455	20.3008	12.218
ENSAPOG00000000128	acanthochromis_polyacanthus	ENSAPOP00000023444	26.9231	18.0473	leptobrachium_leishanense	ENSLLEP00000037468	12.1495	8.14419

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression