RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSAPLG00020002605	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	9478 bases	Strand	Minus strand
Position	1 : 144658572 - 144668049	RNA binding domain	Smg4_UPF3
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSAPLP00020003540	Smg4_UPF3	PF03467	9.4e-45	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSAPLT00020003803	690	229aa	ENSAPLP00020003540

Gene Model

Click here to download ENSAPLG00020002605's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSAPLG00020002605's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAPLG00020002605

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAPLG00020002605

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression