| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSAPEG00000002937 | Gene ID |
|
Accession |
- |
| Symbol |
lrpprc |
Alias |
- |
Full Name |
leucine-rich pentatricopeptide repeat containing |
| Status |
Confidence |
Length |
78142 bases |
Strand |
Plus strand |
| Position |
20 : 4101830 - 4179971 |
RNA binding domain |
PPR_3 , PPR_long , PPR |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSAPEP00000004420 |
PPR_3 |
PF13812 |
7.5e-25 |
1 |
| ENSAPEP00000004420 |
PPR_3 |
PF13812 |
7.5e-25 |
2 |
| ENSAPEP00000004420 |
PPR_long |
PF17177 |
3e-26 |
3 |
| ENSAPEP00000004420 |
PPR |
PF01535 |
3.2e-33 |
4 |
| ENSAPEP00000004420 |
PPR |
PF01535 |
3.2e-33 |
5 |
| ENSAPEP00000004420 |
PPR |
PF01535 |
3.2e-33 |
6 |
| ENSAPEP00000004420 |
PPR |
PF01535 |
3.2e-33 |
7 |
| ENSAPEP00000004420 |
PPR |
PF01535 |
3.2e-33 |
8 |
| ENSAPEP00000004420 |
PPR |
PF01535 |
3.2e-33 |
9 |
| ENSAPEP00000004453 |
PPR_3 |
PF13812 |
9.5e-23 |
1 |
| ENSAPEP00000004453 |
PPR_3 |
PF13812 |
9.5e-23 |
2 |
| ENSAPEP00000004453 |
PPR_long |
PF17177 |
4e-26 |
3 |
| ENSAPEP00000004453 |
PPR |
PF01535 |
3.4e-23 |
4 |
| ENSAPEP00000004453 |
PPR |
PF01535 |
3.4e-23 |
5 |
| ENSAPEP00000004453 |
PPR |
PF01535 |
3.4e-23 |
6 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| lrpprc-201 |
ENSAPET00000004539 |
4137 |
1378aa |
ENSAPEP00000004420 |
| lrpprc-202 |
ENSAPET00000004571 |
3726 |
1241aa |
ENSAPEP00000004453 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSAPEG00000002937 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 85.2685 | 74.238 | fundulus_heteroclitus | ENSFHEP00000017838 | 82.6882 | 71.9916 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 82.656 | 72.2787 | xiphophorus_maculatus | ENSXMAP00000018156 | 80.4947 | 70.3887 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 83.4543 | 72.061 | oryzias_latipes | ENSORLP00000005797 | 79.9722 | 69.0542 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 78.1567 | 70.3919 | astatotilapia_calliptera | ENSACLP00000035182 | 82.3394 | 74.159 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 85.9942 | 76.0522 | cyprinodon_variegatus | ENSCVAP00000026988 | 83.392 | 73.7509 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 30.6967 | 27.2134 | oryzias_melastigma | ENSOMEP00000028638 | 82.2957 | 72.9572 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 74.6734 | 67.2714 | neolamprologus_brichardi | ENSNBRP00000017258 | 85.3942 | 76.9295 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 82.2932 | 71.4078 | poecilia_formosa | ENSPFOP00000011667 | 80.3116 | 69.6884 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 95.5733 | 94.9927 | amphiprion_ocellaris | ENSAOCP00000002732 | 92.1624 | 91.6025 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 80.1887 | 69.6662 | gasterosteus_aculeatus | ENSGACP00000014169 | 79.3252 | 68.916 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 79.463 | 67.2714 | tetraodon_nigroviridis | ENSTNIP00000010279 | 79.4054 | 67.2226 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 87.0827 | 78.2293 | maylandia_zebra | ENSMZEP00005036721 | 83.8574 | 75.3319 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 82.2206 | 73.5849 | amphilophus_citrinellus | ENSACIP00000012395 | 84.4262 | 75.5589 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 78.7373 | 70.2467 | pundamilia_nyererei | ENSPNYP00000001107 | 80.8495 | 72.1311 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 80.2612 | 69.3759 | stegastes_partitus | ENSSPAP00000000169 | 76.699 | 66.2968 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 60.8853 | 41.9448 | petromyzon_marinus | ENSPMAP00000002368 | 63.8508 | 43.9878 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 17.344 | 12.0464 | eptatretus_burgeri | ENSEBUP00000025786 | 61.7571 | 42.8941 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 74.238 | 57.1118 | latimeria_chalumnae | ENSLACP00000015933 | 71.4885 | 54.9965 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 77.3585 | 60.2322 | lepisosteus_oculatus | ENSLOCP00000020256 | 72.3693 | 56.3476 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 74.746 | 56.3861 | danio_rerio | ENSDARP00000111776 | 70.4997 | 53.1828 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 55.6604 | 40.0581 | choloepus_hoffmanni | ENSCHOP00000003231 | 55.2992 | 39.7981 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 49.2743 | 35.3411 | erinaceus_europaeus | ENSEEUP00000011323 | 52.7994 | 37.8694 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 68.6502 | 49.5646 | dasypus_novemcinctus | ENSDNOP00000009798 | 68.0086 | 49.1014 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 47.0247 | 33.0914 | dasypus_novemcinctus | ENSDNOP00000020662 | 60.8451 | 42.8169 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 68.2148 | 49.0566 | echinops_telfairi | ENSETEP00000005410 | 67.4803 | 48.5284 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 69.3759 | 49.5646 | cercocebus_atys | ENSCATP00000003773 | 65.4346 | 46.7488 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 69.1582 | 49.8549 | macaca_nemestrina | ENSMNEP00000015080 | 68.2176 | 49.1768 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 68.5051 | 50.0726 | mustela_putorius_furo | ENSMPUP00000011706 | 67.5734 | 49.3916 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 66.836 | 48.1858 | tursiops_truncatus | ENSTTRP00000006060 | 66.1163 | 47.6669 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 67.0537 | 47.7504 | loxodonta_africana | ENSLAFP00000019681 | 65.9529 | 46.9665 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 51.8868 | 38.0261 | procavia_capensis | ENSPCAP00000001447 | 52.0378 | 38.1368 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 68.7228 | 49.5646 | capra_hircus | ENSCHIP00000022836 | 68.0805 | 49.1014 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 57.2569 | 39.9129 | ochotona_princeps | ENSOPRP00000015336 | 57.0087 | 39.7399 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 67.7794 | 48.3309 | cricetulus_griseus_chok1gshd | ENSCGRP00001015743 | 67.0977 | 47.8448 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 59.434 | 41.5094 | cavia_porcellus | ENSCPOP00000000178 | 68.0798 | 47.5478 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 43.6865 | 31.1321 | pelodiscus_sinensis | ENSPSIP00000007632 | 69.3548 | 49.424 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 11.7562 | 10.3774 | pelodiscus_sinensis | ENSPSIP00000017651 | 69.2308 | 61.1111 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 63.3527 | 45.5733 | vicugna_pacos | ENSVPAP00000008367 | 65.1007 | 46.8307 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 68.2874 | 48.8389 | otolemur_garnettii | ENSOGAP00000011476 | 67.552 | 48.313 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 67.7068 | 48.4035 | chinchilla_lanigera | ENSCLAP00000007399 | 66.8338 | 47.7794 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 56.7489 | 41.1466 | sorex_araneus | ENSSARP00000000394 | 66.5532 | 48.2553 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 68.8679 | 49.0566 | ictidomys_tridecemlineatus | ENSSTOP00000029316 | 66.2247 | 47.1738 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 68.9405 | 49.8549 | myotis_lucifugus | ENSMLUP00000009670 | 68.1004 | 49.2473 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 69.5936 | 49.7823 | chlorocebus_sabaeus | ENSCSAP00000009186 | 68.598 | 49.0701 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 67.4891 | 48.4761 | nomascus_leucogenys | ENSNLEP00000020435 | 67.4402 | 48.4409 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 67.9971 | 49.5646 | panthera_tigris_altaica | ENSPTIP00000000544 | 67.2166 | 48.9957 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 67.7794 | 48.9115 | microtus_ochrogaster | ENSMOCP00000006424 | 67.0977 | 48.4195 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 66.2554 | 47.9681 | pteropus_vampyrus | ENSPVAP00000001898 | 65.495 | 47.4175 |
| ENSAPEG00000002937 | amphiprion_percula | ENSAPEP00000004420 | 23.73 | 10.6676 | saccharomyces_cerevisiae | YLR067C | 33.886 | 15.2332 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
