Description

Ensembl ID ENSAOWG00000006438 Gene ID Accession -
Symbol Alias - Full Name cold shock domain containing E1
Status Confidence Length 15344 bases Strand Plus strand
Position PTFC01000039.1 : 235422 - 250765 RNA binding domain CSD , SUZ-C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSAOWP00000010327 CSD PF00313 1.7e-82 1
ENSAOWP00000010327 CSD PF00313 1.7e-82 2
ENSAOWP00000010327 CSD PF00313 1.7e-82 3
ENSAOWP00000010327 CSD PF00313 1.7e-82 4
ENSAOWP00000010327 CSD PF00313 1.7e-82 5
ENSAOWP00000010327 SUZ-C PF12901 2.6e-15 6
ENSAOWP00000010323 CSD PF00313 3.2e-82 1
ENSAOWP00000010323 CSD PF00313 3.2e-82 2
ENSAOWP00000010323 CSD PF00313 3.2e-82 3
ENSAOWP00000010323 CSD PF00313 3.2e-82 4
ENSAOWP00000010323 CSD PF00313 3.2e-82 5
ENSAOWP00000010323 SUZ-C PF12901 2.8e-15 6
ENSAOWP00000010347 CSD PF00313 7.8e-73 1
ENSAOWP00000010347 CSD PF00313 7.8e-73 2
ENSAOWP00000010347 CSD PF00313 7.8e-73 3
ENSAOWP00000010347 CSD PF00313 7.8e-73 4
ENSAOWP00000010347 SUZ-C PF12901 2.9e-15 5
ENSAOWP00000010374 CSD PF00313 7.8e-47 1
ENSAOWP00000010374 CSD PF00313 7.8e-47 2
ENSAOWP00000010374 CSD PF00313 7.8e-47 3
ENSAOWP00000010374 SUZ-C PF12901 1.4e-15 4
ENSAOWP00000010361 CSD PF00313 3.5e-46 1
ENSAOWP00000010361 CSD PF00313 3.5e-46 2
ENSAOWP00000010361 CSD PF00313 3.5e-46 3
ENSAOWP00000010361 SUZ-C PF12901 1.5e-15 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSAOWT00000011740 2535 844aa ENSAOWP00000010323
- ENSAOWT00000011743 2442 813aa ENSAOWP00000010327
- ENSAOWT00000011765 2235 744aa ENSAOWP00000010347
- ENSAOWT00000011779 1329 442aa ENSAOWP00000010361
- ENSAOWT00000011792 1335 444aa ENSAOWP00000010374

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAOWG00000006438

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAOWG00000006438

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression