RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSAOWG00000004944	Gene ID		Accession	-
Symbol		Alias	-	Full Name	arginyl-tRNA synthetase 1
Status	Confidence	Length	16312 bases	Strand	Minus strand
Position	PTFC01000014.1 : 4227510 - 4243821	RNA binding domain	tRNA-synt_1d , Arg_tRNA_synt_N , DALR_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSAOWP00000007189	tRNA-synt_1d	PF00750	1e-157	1
ENSAOWP00000007189	Arg_tRNA_synt_N	PF03485	1.3e-23	2
ENSAOWP00000007189	DALR_1	PF05746	1.3e-32	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSAOWT00000008133	2035	659aa	ENSAOWP00000007189

Gene Model

Click here to download ENSAOWG00000004944's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSAOWG00000004944's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAOWG00000004944

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAOWG00000004944

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression