Description

Ensembl ID ENSAOWG00000003845 Gene ID Accession -
Symbol Alias - Full Name UPF1 RNA helicase and ATPase
Status Confidence Length 18448 bases Strand Minus strand
Position PTFC01000507.1 : 561678 - 580125 RNA binding domain ResIII , UPF1_1B_dom , UPF1_Zn_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSAOWP00000005794 ResIII PF04851 2.2e-05 1
ENSAOWP00000005794 UPF1_1B_dom PF18141 9.1e-32 2
ENSAOWP00000005794 UPF1_Zn_bind PF09416 2e-77 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSAOWT00000006566 3243 1080aa ENSAOWP00000005794

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAOWG00000003845

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAOWG00000003845

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression