RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSAOCG00000024353	Gene ID	111576146	Accession	-
Symbol	magoh	Alias	-	Full Name	mago homolog, exon junction complex subunit
Status	Confidence	Length	7721 bases	Strand	Minus strand
Position	NXFZ01003128.1 : 203854 - 211574	RNA binding domain	Mago_nashi
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSAOCP00000032183	Mago_nashi	PF02792	2.7e-77	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
magoh-201	ENSAOCT00000033430	5098	147aa	ENSAOCP00000032183

Gene Model

Click here to download ENSAOCG00000024353's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSAOCG00000024353's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000000701	87.5	75	amphiprion_ocellaris	ENSAOCP00000032183	38.0952	32.6531

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	fundulus_heteroclitus	ENSFHEP00000012292	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	oryzias_latipes	ENSORLP00000032291	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	99.3197	97.2789	xiphophorus_maculatus	ENSXMAP00000031668	97.9866	95.9732
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	97.2789	96.5986	cyclopterus_lumpus	ENSCLMP00005021080	93.4641	92.8105
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	98.6395	97.9592	poecilia_reticulata	ENSPREP00000019956	97.3154	96.6443
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	astatotilapia_calliptera	ENSACLP00000040032	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	oreochromis_niloticus	ENSONIP00000024197	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	sparus_aurata	ENSSAUP00010018735	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	haplochromis_burtoni	ENSHBUP00000009436	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	oryzias_melastigma	ENSOMEP00000000689	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	cyprinodon_variegatus	ENSCVAP00000003899	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	44.898	44.898	lates_calcarifer	ENSLCAP00010049431	85.7143	85.7143
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	99.3197	99.3197	takifugu_rubripes	ENSTRUP00000078039	99.3197	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	poecilia_formosa	ENSPFOP00000016209	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	scophthalmus_maximus	ENSSMAP00000006032	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	98.6395	97.2789	seriola_dumerili	ENSSDUP00000000579	97.3154	95.9732
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	poecilia_latipinna	ENSPLAP00000014031	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	cottoperca_gobio	ENSCGOP00000005498	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	97.2789	97.2789	amphilophus_citrinellus	ENSACIP00000019545	95.3333	95.3333
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	anabas_testudineus	ENSATEP00000038853	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	gasterosteus_aculeatus	ENSGACP00000005087	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	betta_splendens	ENSBSLP00000023661	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	83.6735	83.6735	labrus_bergylta	ENSLBEP00000001420	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	amphiprion_percula	ENSAPEP00000032945	91.3043	91.3043
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	pundamilia_nyererei	ENSPNYP00000028979	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	maylandia_zebra	ENSMZEP00005014575	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	hippocampus_comes	ENSHCOP00000020262	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	97.9592	97.2789	larimichthys_crocea	ENSLCRP00005017679	96.6443	95.9732
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	oryzias_sinensis	ENSOSIP00000044740	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	seriola_lalandi_dorsalis	ENSSLDP00000000622	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	mastacembelus_armatus	ENSMAMP00000036930	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	sander_lucioperca	ENSSLUP00000048914	99.3243	99.3243
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	acanthochromis_polyacanthus	ENSAPOP00000013325	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	88.4354	85.7143	nothobranchius_furzeri	ENSNFUP00015020419	73.4463	71.1864
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	stegastes_partitus	ENSSPAP00000010926	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	85.034	83.6735	cynoglossus_semilaevis	ENSCSEP00000001098	93.2836	91.791
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	neolamprologus_brichardi	ENSNBRP00000021604	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	99.3197	97.9592	tetraodon_nigroviridis	ENSTNIP00000009952	98.6487	97.2973
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	91.8367	91.1565	oryzias_javanicus	ENSOJAP00000002932	97.1223	96.4029
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	kryptolebias_marmoratus	ENSKMAP00000023708	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	87.7551	78.9116	caenorhabditis_elegans	R09B3.5.1	84.8684	76.3158
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	93.1973	89.1156	drosophila_melanogaster	FBpp0071497	93.1973	89.1156
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	91.1565	85.034	ciona_intestinalis	ENSCINP00000005510	91.1565	85.034
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	98.6395	93.8775	eptatretus_burgeri	ENSEBUP00000026153	98.6395	93.8775
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	98.6395	97.9592	latimeria_chalumnae	ENSLACP00000017013	97.973	97.2973
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	98.6395	97.9592	lepisosteus_oculatus	ENSLOCP00000007374	98.6395	97.9592
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	clupea_harengus	ENSCHAP00000046619	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	danio_rerio	ENSDARP00000056404	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	carassius_auratus	ENSCARP00000077874	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	carassius_auratus	ENSCARP00000073372	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	ictalurus_punctatus	ENSIPUP00000003010	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	47.619	47.619	ictalurus_punctatus	ENSIPUP00000001785	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	electrophorus_electricus	ENSEEEP00000013495	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	esox_lucius	ENSELUP00000025308	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	oncorhynchus_kisutch	ENSOKIP00005040822	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	oncorhynchus_kisutch	ENSOKIP00005066389	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	oncorhynchus_mykiss	ENSOMYP00000083008	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	82.3129	74.1497	oncorhynchus_mykiss	ENSOMYP00000076741	65.4054	58.9189
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	81.6327	81.6327	salmo_salar	ENSSSAP00000019831	93.75	93.75
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	salmo_trutta	ENSSTUP00000075685	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	salmo_trutta	ENSSTUP00000037319	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	82.9932	81.6327	gadus_morhua	ENSGMOP00000037029	72.619	71.4286
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	98.6395	97.9592	erpetoichthys_calabaricus	ENSECRP00000011387	97.973	97.2973
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	pygocentrus_nattereri	ENSPNAP00000036375	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	pygocentrus_nattereri	ENSPNAP00000016605	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	98.6395	98.6395	hucho_hucho	ENSHHUP00000042867	98.6395	98.6395
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	hucho_hucho	ENSHHUP00000013438	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	81.6327	74.8299	oncorhynchus_tshawytscha	ENSOTSP00005017850	67.7966	62.1469
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	oncorhynchus_tshawytscha	ENSOTSP00005040697	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	scleropages_formosus	ENSSFOP00015035184	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	99.3197	98.6395	sinocyclocheilus_grahami	ENSSGRP00000032112	99.3197	98.6395
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	99.3197	sinocyclocheilus_grahami	ENSSGRP00000027939	100	99.3197
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	99.3197	99.3197	denticeps_clupeoides	ENSDCDP00000012338	97.9866	97.9866
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	paramormyrops_kingsleyae	ENSPKIP00000030489	100	100
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	82.3129	80.9524	cyprinus_carpio_carpio	ENSCCRP00000019730	96.8	95.2
ENSAOCG00000024353	amphiprion_ocellaris	ENSAOCP00000032183	100	100	myripristis_murdjan	ENSMMDP00005026403	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression