RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSANAG00000037632	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	292 bases	Strand	Plus strand
Position	KZ200264.1 : 10020170 - 10020461	RNA binding domain	Ribosomal_L44
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSANAP00000040559	Ribosomal_L44	PF00935	5.1e-26	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSANAT00000058668	264	87aa	ENSANAP00000040559

Gene Model

Click here to download ENSANAG00000037632's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSANAG00000037632's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000001200	77.3585	75.4717	aotus_nancymaae	ENSANAP00000040559	94.2529	91.954
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000001532	75.9615	73.0769	aotus_nancymaae	ENSANAP00000040559	90.8046	87.3563
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000000467	77.8846	75	aotus_nancymaae	ENSANAP00000040559	93.1034	89.6552
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000003248	78.3019	77.3585	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	93.1034	sarcophilus_harrisii	ENSSHAP00000027853	38.2488	37.3272
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	choloepus_hoffmanni	ENSCHOP00000008466	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	64.3678	56.3218	callithrix_jacchus	ENSCJAP00000070598	70.8861	62.0253
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	cercocebus_atys	ENSCATP00000002508	58.4507	57.7465
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	89.6552	88.5057	pan_paniscus	ENSPPAP00000036839	67.2414	66.3793
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	89.6552	88.5057	pan_troglodytes	ENSPTRP00000064564	67.2414	66.3793
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	loxodonta_africana	ENSLAFP00000016108	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	89.6552	86.2069	sus_scrofa	ENSSSCP00000081254	67.8261	65.2174
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	bos_taurus	ENSBTAP00000053140	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	camelus_dromedarius	ENSCDRP00005019105	53.8961	53.2468
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	ovis_aries_rambouillet	ENSOARP00020023873	79.0476	78.0952
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	93.1034	marmota_marmota_marmota	ENSMMMP00000019742	59.854	59.1241
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	urocitellus_parryii	ENSUPAP00010010202	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	ochotona_princeps	ENSOPRP00000008371	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	dipodomys_ordii	ENSDORP00000014846	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	mus_caroli	MGP_CAROLIEiJ_P0032401	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	cricetulus_griseus_chok1gshd	ENSCGRP00001010777	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	mus_spretus	MGP_SPRETEiJ_P0053749	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	93.1034	85.0575	rattus_norvegicus	ENSRNOP00000048252	77.1429	70.4762
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	79.3103	78.1609	rattus_norvegicus	ENSRNOP00000086816	88.4615	87.1795
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	cavia_porcellus	ENSCPOP00000026505	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	86.2069	80.4598	heterocephalus_glaber_female	ENSHGLP00000028361	74.2574	69.3069
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	57.4713	48.2759	microcebus_murinus	ENSMICP00000022114	92.5926	77.7778
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	89.6552	sorex_araneus	ENSSARP00000001952	77.3585	73.5849
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	jaculus_jaculus	ENSJJAP00000008265	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	rhinopithecus_roxellana	ENSRROP00000002017	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	cebus_imitator	ENSCCAP00000003871	78.3019	77.3585
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	catagonus_wagneri	ENSCWAP00000022300	58.4507	57.7465
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	panthera_tigris_altaica	ENSPTIP00000013081	79.0476	78.0952
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	nomascus_leucogenys	ENSNLEP00000026704	58.4507	57.7465
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	monodon_monoceros	ENSMMNP00015014955	58.4507	57.7465
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	87.3563	82.7586	sciurus_vulgaris	ENSSVLP00005024371	87.3563	82.7586
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	cervus_hanglu_yarkandensis	ENSCHYP00000024620	48.2558	47.6744
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	90.8046	phocoena_sinus	ENSPSNP00000031434	80.3922	77.451
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529	saimiri_boliviensis_boliviensis	ENSSBOP00000035678	58.4507	57.7465
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	90.8046	callorhinchus_milii	ENSCMIP00000004264	54.3046	52.3179
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	41.3793	33.3333	astyanax_mexicanus	ENSAMXP00000027880	51.4286	41.4286
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	89.6552	85.0575	poecilia_reticulata	ENSPREP00000018725	54.9296	52.1127
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	93.1034	oryzias_latipes	ENSORLP00000030741	47.9532	47.3684
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	89.6552	xenopus_tropicalis	ENSXETP00000111246	77.3585	73.5849
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	93.1034	crocodylus_porosus	ENSCPRP00005013477	79.0476	77.1429
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	89.6552	sphenodon_punctatus	ENSSPUP00000022774	78.0952	74.2857
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	91.954	erpetoichthys_calabaricus	ENSECRP00000019663	61.6541	60.1504
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	91.954	betta_splendens	ENSBSLP00000053840	50	48.7805
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	91.954	anser_brachyrhynchus	ENSABRP00000000761	78.0952	76.1905
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	95.4023	93.1034	salvator_merianae	ENSSMRP00000016923	61.4815	60
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	91.954	88.5057	amphiprion_ocellaris	ENSAOCP00000015454	68.9655	66.3793
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	93.1034	89.6552	amphiprion_percula	ENSAPEP00000006826	76.4151	73.5849
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	91.954	seriola_dumerili	ENSSDUP00000006752	56.1644	54.7945
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	91.954	denticeps_clupeoides	ENSDCDP00000026378	22.5895	22.0386
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	91.954	geospiza_fortis	ENSGFOP00000003384	78.0952	76.1905
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	93.1034	90.8046	stegastes_partitus	ENSSPAP00000013755	52.2581	50.9677
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	58.6207	52.8736	labrus_bergylta	ENSLBEP00000005280	37.7778	34.0741
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	93.1034	89.6552	hippocampus_comes	ENSHCOP00000021191	76.4151	73.5849
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	89.6552	leptobrachium_leishanense	ENSLLEP00000027703	62.1212	59.0909
ENSANAG00000037632	aotus_nancymaae	ENSANAP00000040559	94.2529	90.8046	cyprinus_carpio_carpio	ENSCCRP00000152734	47.9532	46.1988

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression