Description

Ensembl ID ENSAMXG00005012979 Gene ID 103041511 Accession -
Symbol Alias - Full Name FMR1 autosomal homolog 1
Status Confidence Length 11013 bases Strand Plus strand
Position KB882223.1 : 165101 - 176113 RNA binding domain Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSAMXP00005036246 Agenet PF05641 8.4e-15 1
ENSAMXP00005036246 Agenet PF05641 8.4e-15 2
ENSAMXP00005036246 FXR_C1 PF16096 1.3e-25 3
ENSAMXP00005036246 KH_1 PF00013 4.4e-18 4
ENSAMXP00005036246 KH_1 PF00013 4.4e-18 5
ENSAMXP00005036246 KH_9 PF17904 7.6e-34 6
ENSAMXP00005036246 FXMRP1_C_core PF12235 5.1e-58 7
ENSAMXP00005036177 Agenet PF05641 9.6e-15 1
ENSAMXP00005036177 Agenet PF05641 9.6e-15 2
ENSAMXP00005036177 FXR_C1 PF16096 4.6e-37 3
ENSAMXP00005036177 KH_1 PF00013 4.8e-18 4
ENSAMXP00005036177 KH_1 PF00013 4.8e-18 5
ENSAMXP00005036177 KH_9 PF17904 7.7e-34 6
ENSAMXP00005036177 FXMRP1_C_core PF12235 5.5e-58 7
ENSAMXP00005036157 Agenet PF05641 1e-14 1
ENSAMXP00005036157 Agenet PF05641 1e-14 2
ENSAMXP00005036157 FXR_C1 PF16096 4e-37 3
ENSAMXP00005036157 KH_1 PF00013 4.2e-18 4
ENSAMXP00005036157 KH_1 PF00013 4.2e-18 5
ENSAMXP00005036157 KH_9 PF17904 2e-15 6
ENSAMXP00005036157 FXMRP1_C_core PF12235 5.3e-37 7
ENSAMXP00005036157 FXMRP1_C_core PF12235 5.3e-37 8
ENSAMXP00005035678 Agenet PF05641 1.2e-14 1
ENSAMXP00005035678 Agenet PF05641 1.2e-14 2
ENSAMXP00005035678 FXR_C1 PF16096 4.7e-37 3
ENSAMXP00005035678 KH_1 PF00013 5.8e-18 4
ENSAMXP00005035678 KH_1 PF00013 5.8e-18 5
ENSAMXP00005035678 KH_9 PF17904 1.1e-33 6
ENSAMXP00005035678 FXMRP1_C_core PF12235 2.1e-55 7
ENSAMXP00005036146 Agenet PF05641 1.7e-14 1
ENSAMXP00005036146 Agenet PF05641 1.7e-14 2
ENSAMXP00005036146 FXR_C1 PF16096 1e-36 3
ENSAMXP00005036146 KH_1 PF00013 5.6e-18 4
ENSAMXP00005036146 KH_1 PF00013 5.6e-18 5
ENSAMXP00005036146 KH_9 PF17904 4.8e-34 6
ENSAMXP00005036146 FXMRP1_C_core PF12235 7.8e-37 7
ENSAMXP00005036146 FXMRP1_C_core PF12235 7.8e-37 8
ENSAMXP00005035639 Agenet PF05641 2.4e-14 1
ENSAMXP00005035639 Agenet PF05641 2.4e-14 2
ENSAMXP00005035639 FXR_C1 PF16096 1e-36 3
ENSAMXP00005035639 KH_1 PF00013 6.5e-18 4
ENSAMXP00005035639 KH_1 PF00013 6.5e-18 5
ENSAMXP00005035639 KH_9 PF17904 1.1e-33 6
ENSAMXP00005035639 FXMRP1_C_core PF12235 2.2e-55 7
ENSAMXP00005036494 Agenet PF05641 3.9e-11 1
ENSAMXP00005036494 KH_1 PF00013 3.8e-18 2
ENSAMXP00005036494 KH_1 PF00013 3.8e-18 3
ENSAMXP00005036494 KH_9 PF17904 6.6e-34 4
ENSAMXP00005036494 FXMRP1_C_core PF12235 1.6e-55 5
ENSAMXP00005036259 Agenet PF05641 1.2e-10 1
ENSAMXP00005036259 FXR_C1 PF16096 4.3e-37 2
ENSAMXP00005036259 KH_1 PF00013 5.2e-18 3
ENSAMXP00005036259 KH_1 PF00013 5.2e-18 4
ENSAMXP00005036259 KH_9 PF17904 4.3e-34 5
ENSAMXP00005036259 FXMRP1_C_core PF12235 6.5e-37 6
ENSAMXP00005036259 FXMRP1_C_core PF12235 6.5e-37 7
ENSAMXP00005036517 Agenet PF05641 1.8e-10 1
ENSAMXP00005036517 FXR_C1 PF16096 1.1e-36 2
ENSAMXP00005036517 KH_1 PF00013 6.8e-18 3
ENSAMXP00005036517 KH_1 PF00013 6.8e-18 4
ENSAMXP00005036517 KH_9 PF17904 1.4e-33 5
ENSAMXP00005036517 FXMRP1_C_core PF12235 6.7e-58 6
ENSAMXP00005036358 Agenet PF05641 2.6e-10 1
ENSAMXP00005036358 FXR_C1 PF16096 4.5e-37 2
ENSAMXP00005036358 KH_1 PF00013 5.7e-18 3
ENSAMXP00005036358 KH_1 PF00013 5.7e-18 4
ENSAMXP00005036358 KH_9 PF17904 1.1e-33 5
ENSAMXP00005036358 FXMRP1_C_core PF12235 6e-58 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSAMXT00005038870 2503 671aa ENSAMXP00005035639
- ENSAMXT00005038908 2394 645aa ENSAMXP00005035678
- ENSAMXT00005039409 2311 638aa ENSAMXP00005036146
- ENSAMXT00005039421 2116 573aa ENSAMXP00005036157
- ENSAMXT00005039439 2182 595aa ENSAMXP00005036177
- ENSAMXT00005039508 2107 570aa ENSAMXP00005036246
- ENSAMXT00005039521 1824 607aa ENSAMXP00005036259
- ENSAMXT00005039632 1896 631aa ENSAMXP00005036358
- ENSAMXT00005039779 1644 547aa ENSAMXP00005036494
- ENSAMXT00005039807 2013 670aa ENSAMXP00005036517

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAMXG00005012979

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSAMXG00005012979

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression