RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSAMEG00000010818	Gene ID	100483573	Accession	-
Symbol		Alias	-	Full Name	DNA dC->dU-editing enzyme APOBEC-3H
Status	Confidence	Length	12144 bases	Strand	Plus strand
Position	15 : 81921933 - 81934076	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSAMEP00000011384	APOBEC_N	PF08210	1.5e-43	1
ENSAMEP00000011384	APOBEC_C	PF05240	3.2e-29	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSAMET00000011869	2606	250aa	ENSAMEP00000011384

Gene Model

Click here to download ENSAMEG00000010818's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSAMEG00000010818's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000007460	48.0952	30.9524	ailuropoda_melanoleuca	ENSAMEP00000011384	40.4	26
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011361	49.4949	32.8283	ailuropoda_melanoleuca	ENSAMEP00000011384	39.2	26
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000007480	40.4255	22.5532	ailuropoda_melanoleuca	ENSAMEP00000011384	38	21.2
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000004700	35.0877	22.3684	ailuropoda_melanoleuca	ENSAMEP00000011384	32	20.4

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	36.4	20.4	sarcophilus_harrisii	ENSSHAP00000043123	31.5972	17.7083
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	50.4	37.6	callithrix_jacchus	ENSCJAP00000073454	61.4634	45.8537
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	48.8	35.2	cercocebus_atys	ENSCATP00000012268	61.3065	44.2211
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	53.6	38	macaca_fascicularis	ENSMFAP00000017385	63.8095	45.2381
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	53.2	38.4	macaca_mulatta	ENSMMUP00000053576	51.1538	36.9231
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	54	38	macaca_nemestrina	ENSMNEP00000031743	63.981	45.0237
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	48.8	33.6	papio_anubis	ENSPANP00000048484	50.2058	34.5679
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	53.6	38	mandrillus_leucophaeus	ENSMLEP00000018470	63.5071	45.0237
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	48.8	35.6	pan_paniscus	ENSPPAP00000026886	61	44.5
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	48.8	35.6	pan_troglodytes	ENSPTRP00000083401	61	44.5
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52	37.6	pongo_abelii	ENSPPYP00000041270	61.6114	44.5498
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	47.6	34.8	homo_sapiens	ENSP00000411754	65.0273	47.541
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	64	51.6	canis_lupus_familiaris	ENSCAFP00845030766	64	51.6
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	64	52	vulpes_vulpes	ENSVVUP00000019753	53.1561	43.1894
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	66.4	62	ursus_americanus	ENSUAMP00000004881	75.1131	70.1357
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	49.2	33.6	loxodonta_africana	ENSLAFP00000026875	33.4239	22.8261
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	51.6	40.8	tursiops_truncatus	ENSTTRP00000001189	72.4719	57.3034
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52.4	40	bos_taurus	ENSBTAP00000003115	34.026	25.974
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	60.4	51.2	mustela_putorius_furo	ENSMPUP00000013141	39.4256	33.4204
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	55.6	44.4	physeter_catodon	ENSPCTP00005011753	33.0952	26.4286
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	38.8	28.8	vicugna_pacos	ENSVPAP00000010345	76.378	56.6929
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	46.8	35.6	dipodomys_ordii	ENSDORP00000022770	30.7895	23.4211
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	53.2	42.4	marmota_marmota_marmota	ENSMMMP00000015540	57.3276	45.6897
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	45.6	34.8	mus_spicilegus	ENSMSIP00000034718	25.9091	19.7727
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	46.4	36.8	tupaia_belangeri	ENSTBEP00000001321	69.4611	55.0898
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	49.2	35.6	rattus_norvegicus	ENSRNOP00000095626	27.7027	20.045
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	44.4	31.6	procavia_capensis	ENSPCAP00000014600	63.7931	45.4023
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	46	36	urocitellus_parryii	ENSUPAP00010028216	53.4884	41.8605
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	37.2	18.4	monodelphis_domestica	ENSMODP00000040505	35.7692	17.6923
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	58.4	48	monodon_monoceros	ENSMMNP00015027558	28.6275	23.5294
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	58.4	48	delphinapterus_leucas	ENSDLEP00000014878	27.3408	22.4719
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	61.2	49.2	sus_scrofa	ENSSSCP00000049864	62.963	50.6173
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	50.8	38.8	mesocricetus_auratus	ENSMAUP00000010970	30.7506	23.4867
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52.4	42.4	equus_asinus	ENSEASP00005036918	42.1222	34.0836
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	48	34.4	mus_pahari	MGP_PahariEiJ_P0042359	27.088	19.4131
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52.4	38.8	cavia_porcellus	ENSCPOP00000008311	31.9512	23.6585
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	45.2	34	mus_caroli	MGP_CAROLIEiJ_P0039006	25.6818	19.3182
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	36.8	20.4	vombatus_ursinus	ENSVURP00010031524	30.8725	17.1141
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	70.8	58.4	felis_catus	ENSFCAP00000059112	55.4859	45.768
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	45.6	34.4	sciurus_vulgaris	ENSSVLP00005019455	24.7826	18.6957
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	58	46.4	panthera_pardus	ENSPPRP00000009485	74.7423	59.7938
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	58	46.8	panthera_tigris_altaica	ENSPTIP00000009121	74.7423	60.3093
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	0	0	bison_bison_bison	ENSBBBP00000011591	0	0
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	51.2	40	bison_bison_bison	ENSBBBP00000011581	72.7273	56.8182
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	51.6	38	heterocephalus_glaber_female	ENSHGLP00000024290	62.3188	45.8937
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	57.2	44	bos_grunniens	ENSBGRP00000004947	58.3673	44.898
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	50.8	38.4	cricetulus_griseus_chok1gshd	ENSCGRP00001025355	30.7506	23.2446
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	51.6	38.4	rhinopithecus_bieti	ENSRBIP00000010473	61.1374	45.4976
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	44.8	34.8	carlito_syrichta	ENSTSYP00000023224	61.8785	48.0663
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52.4	41.2	balaenoptera_musculus	ENSBMSP00010013875	72.7778	57.2222
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52	38.4	nomascus_leucogenys	ENSNLEP00000018472	61.6114	45.4976
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	51.6	39.6	bos_mutus	ENSBMUP00000000416	33.5065	25.7143
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52	39.6	ovis_aries_rambouillet	ENSOARP00020015068	34.9462	26.6129
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52	38.4	rhinopithecus_roxellana	ENSRROP00000006181	56.5217	41.7391
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	51.2	38.4	aotus_nancymaae	ENSANAP00000015030	57.1429	42.8571
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	50.4	38.8	chinchilla_lanigera	ENSCLAP00000024206	62.3762	48.0198
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	42.4	32.4	jaculus_jaculus	ENSJJAP00000014377	28.7263	21.9512
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	67.2	63.2	ursus_maritimus	ENSUMAP00000019740	79.6208	74.8815
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	63.6	50	bos_indicus_hybrid	ENSBIXP00005043951	40.1515	31.5657
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	56	41.6	camelus_dromedarius	ENSCDRP00005019466	33.0969	24.5863
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	54	38.4	chlorocebus_sabaeus	ENSCSAP00000002661	63.981	45.4976
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	60.4	48	canis_lupus_dingo	ENSCAFP00020003085	70.892	56.338
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52.8	38.4	cebus_imitator	ENSCCAP00000001319	61.9718	45.0704
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	46.8	35.6	pteropus_vampyrus	ENSPVAP00000008916	66.4773	50.5682
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	49.6	35.6	nannospalax_galili	ENSNGAP00000019083	29.5943	21.2411
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	53.6	42.8	catagonus_wagneri	ENSCWAP00000020400	33.6683	26.8844
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52	42	ictidomys_tridecemlineatus	ENSSTOP00000006364	62.5	50.4808
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	64	55.2	neovison_vison	ENSNVIP00000001830	78.4314	67.6471
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52.8	42.4	equus_caballus	ENSECAP00000034895	53.2258	42.7419
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	54.4	43.2	phocoena_sinus	ENSPSNP00000013086	32.6139	25.8993
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	48.8	38.4	microtus_ochrogaster	ENSMOCP00000025473	29.0476	22.8571
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	53.2	40.8	capra_hircus	ENSCHIP00000032712	35.5615	27.2727
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	63.6	51.2	cervus_hanglu_yarkandensis	ENSCHYP00000021689	33.5443	27.0042
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52	42	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.7477	49.0654
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	37.6	19.6	phascolarctos_cinereus	ENSPCIP00000049844	36.1538	18.8462
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	46.8	35.2	mus_musculus	ENSMUSP00000135027	26.5909	20
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52	40	moschus_moschiferus	ENSMMSP00000021032	34.9462	26.8817
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	45.6	34	mus_spretus	MGP_SPRETEiJ_P0040813	25.9091	19.3182
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	55.6	41.6	peromyscus_maniculatus_bairdii	ENSPEMP00000000666	31.8078	23.7986
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	42.8	33.6	oryctolagus_cuniculus	ENSOCUP00000035226	21.063	16.5354
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	52.8	36.8	saimiri_boliviensis_boliviensis	ENSSBOP00000027153	55.6962	38.8186
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	34.4	19.2	callorhinchus_milii	ENSCMIP00000004961	40.9524	22.8571
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	33.6	19.2	latimeria_chalumnae	ENSLACP00000018020	24.4186	13.9535
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	38.4	22	lepisosteus_oculatus	ENSLOCP00000004258	35.1648	20.1465
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	35.6	18.4	xenopus_tropicalis	ENSXETP00000073758	40.0901	20.7207
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	37.2	18	anolis_carolinensis	ENSACAP00000018261	34.5725	16.7286
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	28.8	15.2	podarcis_muralis	ENSPMRP00000035742	34.2857	18.0952
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	36	21.6	erpetoichthys_calabaricus	ENSECRP00000021015	34.4828	20.6897
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	32.4	21.2	paramormyrops_kingsleyae	ENSPKIP00000029857	39.1304	25.6039
ENSAMEG00000010818	ailuropoda_melanoleuca	ENSAMEP00000011384	33.6	22.8	scleropages_formosus	ENSSFOP00015009596	42.4242	28.7879

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression