RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSAHAG00000019469	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	5188 bases	Strand	Plus strand
Position	PTFD01000101.1 : 2299346 - 2304533	RNA binding domain	UPF0020 , THUMP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSAHAP00000028017	UPF0020	PF01170	8.3e-48	1
ENSAHAP00000028017	THUMP	PF02926	6.5e-14	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSAHAT00000030847	1597	454aa	ENSAHAP00000028017

Gene Model

Click here to download ENSAHAG00000019469's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSAHAG00000019469's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAHAG00000019469

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSAHAG00000019469

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression