RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSACUG00000003969	Gene ID	113485022	Accession	-
Symbol		Alias	-	Full Name	SHQ1, H/ACA ribonucleoprotein assembly factor
Status	Confidence	Length	50293 bases	Strand	Minus strand
Position	QEEU01000014.1 : 9329817 - 9380109	RNA binding domain	SHQ1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSACUP00000005836	SHQ1	PF04925	9.9e-70	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSACUT00000006226	2430	606aa	ENSACUP00000005836

Gene Model

Click here to download ENSACUG00000003969's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSACUG00000003969's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSACUG00000003969

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSACUG00000003969

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression