RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSACOG00000017077	Gene ID		Accession	-
Symbol		Alias	-	Full Name	SR-related CTD associated factor 8
Status	Confidence	Length	63847 bases	Strand	Plus strand
Position	RQIO01000009.1 : 18083064 - 18146910	RNA binding domain	RRM_1 , CID
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSACOP00000025501	RRM_1	PF00076	4.2e-09	1
ENSACOP00000025501	CID	PF04818	2.5e-25	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSACOT00000026368	4088	1357aa	ENSACOP00000025501

Gene Model

Click here to download ENSACOG00000017077's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSACOG00000017077's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSACOG00000017077

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSACOG00000017077

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression