Description

Ensembl ID ENSACOG00000009376 Gene ID Accession -
Symbol Alias - Full Name polypyrimidine tract binding protein 1
Status Confidence Length 27471 bases Strand Minus strand
Position RQIO01000023.1 : 1557688 - 1585158 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSACOP00000013481 RRM_5 PF13893 8.3e-58 1
ENSACOP00000013481 RRM_5 PF13893 8.3e-58 2
ENSACOP00000013481 RRM_5 PF13893 8.3e-58 3
ENSACOP00000013481 RRM_8 PF11835 4e-14 4
ENSACOP00000013481 RRM_1 PF00076 1.1e-33 5
ENSACOP00000013481 RRM_1 PF00076 1.1e-33 6
ENSACOP00000013481 RRM_1 PF00076 1.1e-33 7
ENSACOP00000013490 RRM_5 PF13893 1.1e-57 1
ENSACOP00000013490 RRM_5 PF13893 1.1e-57 2
ENSACOP00000013490 RRM_8 PF11835 3.9e-14 3
ENSACOP00000013490 RRM_1 PF00076 2.9e-34 4
ENSACOP00000013490 RRM_1 PF00076 2.9e-34 5
ENSACOP00000013490 RRM_1 PF00076 2.9e-34 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSACOT00000013958 1959 551aa ENSACOP00000013481
- ENSACOT00000013968 2400 548aa ENSACOP00000013490

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSACOG00000009376

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSACOG00000009376

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression