Description

Ensembl ID ENSACOG00000001703 Gene ID Accession -
Symbol Alias - Full Name UPF1 RNA helicase and ATPase
Status Confidence Length 22111 bases Strand Minus strand
Position RQIO01000023.1 : 485131 - 507241 RNA binding domain ResIII , UPF1_1B_dom , UPF1_Zn_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSACOP00000002463 ResIII PF04851 2.2e-05 1
ENSACOP00000002463 UPF1_1B_dom PF18141 1.1e-32 2
ENSACOP00000002463 UPF1_Zn_bind PF09416 2e-77 3
ENSACOP00000002466 ResIII PF04851 2.2e-05 1
ENSACOP00000002466 UPF1_1B_dom PF18141 2.2e-29 2
ENSACOP00000002466 UPF1_Zn_bind PF09416 2e-77 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSACOT00000002543 3989 1117aa ENSACOP00000002463
- ENSACOT00000002546 3485 1128aa ENSACOP00000002466

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSACOG00000001703

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSACOG00000001703

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression