RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSACCG00020013022	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1046 bases	Strand	Plus strand
Position	UFQG02000080.1 : 78023 - 79068	RNA binding domain	Med11
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSACCP00020018921	Med11	PF10280	1.1e-06	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSACCT00020019755	585	167aa	ENSACCP00020018921

Gene Model

Click here to download ENSACCG00020013022's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSACCG00020013022's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSACCG00020013022

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSACCG00020013022	aquila_chrysaetos_chrysaetos	ENSACCP00020018921	33.5329	25.1497	oryzias_latipes	ENSORLP00000030902	45.1613	33.871
ENSACCG00020013022	aquila_chrysaetos_chrysaetos	ENSACCP00020018921	46.7066	41.9162	chrysemys_picta_bellii	ENSCPBP00000018258	45.0867	40.4624
ENSACCG00020013022	aquila_chrysaetos_chrysaetos	ENSACCP00020018921	25.7485	18.5629	cyprinodon_variegatus	ENSCVAP00000031770	43.4343	31.3131
ENSACCG00020013022	aquila_chrysaetos_chrysaetos	ENSACCP00020018921	29.3413	18.5629	oryzias_sinensis	ENSOSIP00000004280	39.2	24.8

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression