RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSACAG00000026043	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	22711 bases	Strand	Minus strand
Position	GL343279.1 : 1120167 - 1142877	RNA binding domain	SAP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSACAP00000020431	SAP	PF02037	6.6e-12	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSACAT00000026939	2149	705aa	ENSACAP00000020431

Gene Model

Click here to download ENSACAG00000026043's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSACAG00000026043's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000027911	31.5625	21.1458	anolis_carolinensis	ENSACAP00000020431	42.9787	28.7943
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000023475	27.6353	17.5689	anolis_carolinensis	ENSACAP00000020431	41.2766	26.2411
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000005286	24.1996	16.1017	anolis_carolinensis	ENSACAP00000020431	36.4539	24.2553

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	28.2269	13.9007	caenorhabditis_elegans	T03G11.1c.1	15.0643	7.41862
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	35.6028	19.8582	drosophila_melanogaster	FBpp0310920	14.038	7.82998
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	19.2908	13.4752	petromyzon_marinus	ENSPMAP00000001945	43.038	30.0633
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	32.3404	20	eptatretus_burgeri	ENSEBUP00000010299	27.0142	16.7062
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	40	26.2411	eptatretus_burgeri	ENSEBUP00000016207	23.3058	15.2893
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	49.7872	40.1418	latimeria_chalumnae	ENSLACP00000008235	52.9412	42.6848
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	48.6525	36.1702	clupea_harengus	ENSCHAP00000008690	44.6034	33.1599
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	37.4468	27.6596	danio_rerio	ENSDARP00000118767	42.5121	31.401
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	37.1631	27.234	carassius_auratus	ENSCARP00000063714	42.2581	30.9677
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	37.1631	27.9433	astyanax_mexicanus	ENSAMXP00000031557	43.0921	32.4013
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	36.3121	26.8085	ictalurus_punctatus	ENSIPUP00000011656	42.5249	31.3953
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	48.3688	36.7376	electrophorus_electricus	ENSEEEP00000026528	45.1656	34.3046
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.8014	35.6028	esox_lucius	ENSELUP00000036254	41.1477	30.6471
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.9433	35.3191	oncorhynchus_kisutch	ENSOKIP00005039914	41.5233	30.5897
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	31.7731	24.6809	oncorhynchus_kisutch	ENSOKIP00005024842	38.1601	29.6422
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	48.3688	35.1773	oncorhynchus_mykiss	ENSOMYP00000005388	40.1649	29.2108
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	48.3688	36.0284	salmo_salar	ENSSSAP00000010180	42.0988	31.358
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.9433	35.6028	salmo_salar	ENSSSAP00000010194	41.5744	30.8733
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.6596	35.6028	salmo_trutta	ENSSTUP00000037523	41.6873	31.1414
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.8014	35.8865	salmo_trutta	ENSSTUP00000000755	41.6049	31.2346
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	29.078	22.695	poecilia_reticulata	ENSPREP00000012129	46.3801	36.1991
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	48.0851	35.1773	xiphophorus_maculatus	ENSXMAP00000012057	41.3919	30.2808
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	35.0355	26.9504	cyclopterus_lumpus	ENSCLMP00005045487	40.228	30.9446
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.9433	35.1773	haplochromis_burtoni	ENSHBUP00000012008	40.9697	30.0606
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.9433	35.461	oreochromis_niloticus	ENSONIP00000059477	41.1192	30.4136
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.8014	35.3191	astatotilapia_calliptera	ENSACLP00000032266	40.8485	30.1818
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	49.6454	35.8865	sparus_aurata	ENSSAUP00010051544	41.7661	30.1909
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	63.9716	52.4823	xenopus_tropicalis	ENSXETP00000067308	56.0248	45.9627
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	39.7163	29.5035	lates_calcarifer	ENSLCAP00010019561	41.6667	30.9524
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	50.0709	47.9433	laticauda_laticaudata	ENSLLTP00000012082	87.8109	84.0796
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	49.5035	35.8865	dicentrarchus_labrax	ENSDLAP00005004421	42.0989	30.5187
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	40.4255	32.9078	erpetoichthys_calabaricus	ENSECRP00000027518	43.578	35.474
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	44.9645	32.9078	oryzias_melastigma	ENSOMEP00000009889	39.9748	29.256
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	36.1702	27.3759	seriola_dumerili	ENSSDUP00000012409	40.1575	30.3937
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	31.4894	22.9787	labrus_bergylta	ENSLBEP00000021709	38.4749	28.0763
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	36.7376	27.3759	poecilia_latipinna	ENSPLAP00000021246	46.4991	34.6499
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	48.5106	36.0284	scophthalmus_maximus	ENSSMAP00000020906	41.3543	30.7134
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	40	30.0709	amphilophus_citrinellus	ENSACIP00000007746	43.7888	32.9193
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.9433	37.0213	paramormyrops_kingsleyae	ENSPKIP00000032417	44.4737	34.3421
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	40.8511	30.3546	kryptolebias_marmoratus	ENSKMAP00000007246	39.8892	29.6399
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	44.1135	33.4752	hippocampus_comes	ENSHCOP00000028143	40.285	30.5699
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	27.5177	20.9929	cynoglossus_semilaevis	ENSCSEP00000029324	36.8121	28.0835
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	35.7447	27.234	anabas_testudineus	ENSATEP00000061269	40.1914	30.622
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	33.3333	25.5319	myripristis_murdjan	ENSMMDP00005020088	46.3511	35.503
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.9433	35.1773	neolamprologus_brichardi	ENSNBRP00000003622	40.9201	30.0242
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	32.3404	24.3972	acanthochromis_polyacanthus	ENSAPOP00000013045	42.3792	31.9703
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	37.4468	27.5177	pygocentrus_nattereri	ENSPNAP00000012371	43.1373	31.6993
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	30.2128	22.9787	hucho_hucho	ENSHHUP00000065380	37.0435	28.1739
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	20.8511	14.7518	hucho_hucho	ENSHHUP00000029341	35.9413	25.4279
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	49.2199	36.0284	larimichthys_crocea	ENSLCRP00005031621	39.1648	28.6682
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	48.5106	35.7447	betta_splendens	ENSBSLP00000034909	39.4464	29.0657
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	48.227	35.7447	mastacembelus_armatus	ENSMAMP00000029216	40.4762	30
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	50.0709	36.7376	seriola_lalandi_dorsalis	ENSSLDP00000029214	42.1744	30.9438
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	35.6028	26.0993	nothobranchius_furzeri	ENSNFUP00015032090	42.0436	30.8208
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.8014	34.7518	cyprinus_carpio_carpio	ENSCCRP00000083111	44.0523	32.0261
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.9433	34.3262	cyprinus_carpio_carpio	ENSCCRP00000179910	44.2408	31.6754
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	63.9716	51.773	leptobrachium_leishanense	ENSLLEP00000016434	55.5419	44.9507
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.6596	33.3333	takifugu_rubripes	ENSTRUP00000050413	39.5294	27.6471
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	88.3688	83.2624	salvator_merianae	ENSSMRP00000003406	90.0289	84.8266
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	33.0496	25.2482	amphiprion_ocellaris	ENSAOCP00000009197	43.3086	33.0855
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	38.156	28.7943	stegastes_partitus	ENSSPAP00000021651	37.2576	28.1163
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	49.9291	37.8723	scleropages_formosus	ENSSFOP00015001349	45.2442	34.3188
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.8014	35.3191	maylandia_zebra	ENSMZEP00005022000	40.799	30.1453
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	49.078	35.6028	sinocyclocheilus_grahami	ENSSGRP00000026349	45.2288	32.8105
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.9433	34.7518	sinocyclocheilus_grahami	ENSSGRP00000046245	44.2988	32.1101
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	47.8014	35.1773	pundamilia_nyererei	ENSPNYP00000002141	40.8981	30.0971
ENSACAG00000026043	anolis_carolinensis	ENSACAP00000020431	32.0567	22.9787	poecilia_formosa	ENSPFOP00000010287	41.4679	29.7248

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression