RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSABRG00000005443	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	6346 bases	Strand	Minus strand
Position	NXHY01000362.1 : 267071 - 273416	RNA binding domain	Ribosomal_L35Ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSABRP00000005846	Ribosomal_L35Ae	PF01247	2.6e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSABRT00000008437	327	108aa	ENSABRP00000005846

Gene Model

Click here to download ENSABRG00000005443's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSABRG00000005443's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSABRG00000005443

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	36.1111	26.8519	pseudonaja_textilis	ENSPTXP00000019683	39	29
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	30.5556	25.9259	gorilla_gorilla	ENSGGOP00000043290	49.2537	41.791
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	26.8519	25.9259	panthera_pardus	ENSPPRP00000029732	63.0435	60.8696
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	28.7037	24.0741	sus_scrofa	ENSSSCP00000079010	16.8478	14.1304
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	37.037	26.8519	capra_hircus	ENSCHIP00000002609	27.3973	19.863
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	26.8519	22.2222	heterocephalus_glaber_female	ENSHGLP00000034355	47.541	39.3443
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	27.7778	25	ursus_maritimus	ENSUMAP00000017750	45.4545	40.9091
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	23.1481	18.5185	aotus_nancymaae	ENSANAP00000012074	42.3729	33.8983
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	32.4074	26.8519	rhinopithecus_roxellana	ENSRROP00000025741	41.1765	34.1176
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	33.3333	28.7037	nomascus_leucogenys	ENSNLEP00000039798	50.7042	43.662
ENSABRG00000005443	anser_brachyrhynchus	ENSABRP00000005846	34.2593	28.7037	salvator_merianae	ENSSMRP00000003244	45.122	37.8049

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression