RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSABRG00000001223	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	14525 bases	Strand	Minus strand
Position	NXHY01000279.1 : 584000 - 598524	RNA binding domain	Methyltransf_8
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSABRP00000001177	Methyltransf_8	PF05148	4.2e-80	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSABRT00000001742	3672	1223aa	ENSABRP00000001177

Gene Model

Click here to download ENSABRG00000001223's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSABRG00000001223's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000016386	77.5249	67.4253	anser_brachyrhynchus	ENSABRP00000001177	44.5625	38.7572
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000015089	28.4866	13.9466	anser_brachyrhynchus	ENSABRP00000001177	7.84955	3.84301
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000003214	30.8017	19.4093	anser_brachyrhynchus	ENSABRP00000001177	5.96893	3.76124
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000022255	27.7778	16.4983	anser_brachyrhynchus	ENSABRP00000001177	13.4914	8.01308
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000009771	23.1111	13.1852	anser_brachyrhynchus	ENSABRP00000001177	12.7555	7.27719
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000008501	34.8554	21.4612	anser_brachyrhynchus	ENSABRP00000001177	18.7244	11.529
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000021670	27.0408	18.3673	anser_brachyrhynchus	ENSABRP00000001177	8.66721	5.88716
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000025538	43.5028	25.6121	anser_brachyrhynchus	ENSABRP00000001177	18.888	11.1202
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000025373	23.6145	12.0482	anser_brachyrhynchus	ENSABRP00000001177	8.01308	4.08831
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000023949	46.7192	25.9843	anser_brachyrhynchus	ENSABRP00000001177	14.5544	8.09485

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	69.5012	67.7024	gallus_gallus	ENSGALP00010002161	97.3654	94.8454
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	55.601	54.7016	anas_platyrhynchos_platyrhynchos	ENSAPLP00000024169	94.9721	93.4358
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	55.6827	53.0662	parus_major	ENSPMJP00000006791	90.4382	86.1886
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	56.8275	54.211	ficedula_albicollis	ENSFALP00000019974	85.0673	81.1506
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	52.4939	51.758	struthio_camelus_australis	ENSSCUP00000019992	98.1651	96.789
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	51.1038	49.5503	taeniopygia_guttata	ENSTGUP00000037650	79.8212	77.3946
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	53.4751	52.6574	meleagris_gallopavo	ENSMGAP00000032092	92.1127	90.7042
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	37.4489	36.1406	geospiza_fortis	ENSGFOP00000005275	83.5766	80.6569
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	56.8275	55.1922	coturnix_japonica	ENSCJPP00005005668	86.875	84.375
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	43.6631	43.009	serinus_canaria	ENSSCAP00000004665	99.0724	97.5881
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	48.0785	47.4244	strigops_habroptila	ENSSHBP00005021722	95.4545	94.1558
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	73.7531	71.7089	aquila_chrysaetos_chrysaetos	ENSACCP00020015825	95.8555	93.1987
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	40.2289	33.8512	drosophila_melanogaster	FBpp0073101	37.1041	31.2217
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	22.6492	18.3974	ciona_intestinalis	ENSCINP00000003013	82.4405	66.9643
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	9.73017	8.83074	ciona_intestinalis	ENSCINP00000026786	91.5385	83.0769
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	41.619	37.9395	petromyzon_marinus	ENSPMAP00000008823	90.8929	82.8571
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	41.619	37.776	eptatretus_burgeri	ENSEBUP00000019281	90.4085	82.0604
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	7.76778	6.54129	callorhinchus_milii	ENSCMIP00000005910	76	64
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	37.9395	35.8953	latimeria_chalumnae	ENSLACP00000002956	84.6715	80.1095
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	51.5127	50.1227	chrysemys_picta_bellii	ENSCPBP00000001208	92.511	90.0147
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	52.4939	50.2044	crocodylus_porosus	ENSCPRP00005024347	86.8742	83.0853
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	31.807	30.8258	sphenodon_punctatus	ENSSPUP00000013588	95.11	92.176
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	62.7964	57.1545	laticauda_laticaudata	ENSLLTP00000020773	69.0648	62.8597
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	41.7007	40.4742	notechis_scutatus	ENSNSUP00000009470	94.9721	92.1788
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	17.9886	17.0074	pseudonaja_textilis	ENSPTXP00000016778	85.2713	80.6202
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	40.6378	36.4677	ornithorhynchus_anatinus	ENSOANP00000045638	53.7297	48.2162
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	40.9648	39.7383	anolis_carolinensis	ENSACAP00000010119	94.707	91.8715
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	37.8577	36.3859	naja_naja	ENSNNAP00000011672	90.4297	86.9141
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	36.9583	30.7441	ciona_savignyi	ENSCSAVP00000017290	68.4848	56.9697
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	72.2813	66.5576	podarcis_muralis	ENSPMRP00000003241	76.1413	70.112
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	49.7138	46.5249	salvator_merianae	ENSSMRP00000003659	78.0488	73.0424
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	55.4375	53.8839	gopherus_evgoodei	ENSGEVP00005024039	90.4	87.8667
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	14.5544	7.19542	saccharomyces_cerevisiae	YKR036C	27.6827	13.6858
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	15.045	7.93132	saccharomyces_cerevisiae	YJL112W	25.7703	13.5854
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	11.7743	10.9567	terrapene_carolina_triunguis	ENSTMTP00000018087	88.8889	82.716
ENSABRG00000001223	anser_brachyrhynchus	ENSABRP00000001177	30.3352	28.3729	chelonoidis_abingdonii	ENSCABP00000013154	67.5774	63.2058

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression