Description

Ensembl ID DexiUA01G0017250 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7929 bases Strand Plus strand
Position UA : 36427937 - 36435865 RNA binding domain IF2_N , GTP_EFTU , TruB_N , TruB-C_2 , RNase_PH , RNase_PH_C , PNPase , KH_1 , MMR_HSR1 , IF-2 , Ribosomal_S15 , S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
DexiUA01G0017250 IF2_N PF04760 1.9e-26 1
DexiUA01G0017250 IF2_N PF04760 1.9e-26 2
DexiUA01G0017250 GTP_EFTU PF00009 3.3e-35 3
DexiUA01G0017250 TruB_N PF01509 2.6e-55 4
DexiUA01G0017250 TruB-C_2 PF09157 1.7e-06 5
DexiUA01G0017250 RNase_PH PF01138 4e-33 6
DexiUA01G0017250 RNase_PH PF01138 4e-33 7
DexiUA01G0017250 RNase_PH_C PF03725 4.4e-19 8
DexiUA01G0017250 PNPase PF03726 1.4e-24 9
DexiUA01G0017250 KH_1 PF00013 5.4e-08 10
DexiUA01G0017250 MMR_HSR1 PF01926 7.5e-09 11
DexiUA01G0017250 IF-2 PF11987 1.4e-40 12
DexiUA01G0017250 Ribosomal_S15 PF00312 1.4e-23 13
DexiUA01G0017250 S1 PF00575 2.1e-21 14

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- DexiUA01G0017250.1 6753 2250aa DexiUA01G0017250.1:cds

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
DexiUA01G0017250

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
DexiUA01G0017250

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression