RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Csa_3G016390	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	8668 bases	Strand	Plus strand
Position	3 : 1447837 - 1456504	RNA binding domain	PheRS_DBD1 , PheRS_DBD3 , tRNA-synt_2d
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KGN55794	PheRS_DBD1	PF18552	2.7e-09	1
KGN55794	PheRS_DBD3	PF18553	1.6e-15	2
KGN55794	tRNA-synt_2d	PF01409	6.3e-92	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KGN55794	2000	492aa	KGN55794

Gene Model

Click here to download Csa_3G016390's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Csa_3G016390's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Csa_3G016390

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Csa_3G016390

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression